Transcript Information: S_Transcript_120609.p2


Annotated TAIR IDAT4G32770.1
Annotated Gene Nametocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1)
Annotated Gene Symbol(s)VTE1, ATSDX1
Annotation TypeOrtholog
Chromosome Positionchr4:15804981-15807790 | Forward length=488
E-Value1.1E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1385447421127
Replicate 21.1819351548669
Replicate 31.3173382916857
Condition 2: 8 Hour
Replicate 11.9040527068869
Replicate 21.1984918914139
Replicate 31.522560543213
Condition 3: 24 Hour
Replicate 11.9504360259459
Replicate 22.2259100655341
Replicate 31.3511809502741


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_120609.p2 GENE.S_Transcript_120609~~S_Transcript_120609.p2 ORF type:complete len:112 (+),score=26.37,Tocopherol_cycl|PF14249.2|2.5e-23 S_Transcript_120609:1503-1838(+)
ATGTATGTTGTTGAGAATCCTGCATTCAAAAAGAAATTGACCCCTGGTGAAGAAGCCAAATATGGTAGCCGCTTCGCTGGAACTGGGGCTCAGATTCTAGGTGCTGATGACAAGTACATTTGCCAATACTGTGAAGAATCACATAACTTTTGGGGAAGCAGGCATGAACTGAGTCTGGGAAACACCTTCAAGGCTAGTGAAGGTTCGCAACCTCCAAACAAAGAGGTTCCTCCAGAGGAGTTTAATAGAAGAGTTACAGAAGGTTATCAAGTGACCCCACTTTGGCATCAAGGATTTATTTGTGATGATGACAGGTCAAACTCCTTCGATTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_120609.p2 GENE.S_Transcript_120609~~S_Transcript_120609.p2 ORF type:complete len:112 (+),score=26.37,Tocopherol_cycl|PF14249.2|2.5e-23 S_Transcript_120609:1503-1838(+)
MYVVENPAFKKKLTPGEEAKYGSRFAGTGAQILGADDKYICQYCEESHNFWGSRHELSLGNTFKASEGSQPPNKEVPPEEFNRRVTEGYQVTPLWHQGFICDDDRSNSFDF*

Click here to download the sequence:
Link to NCBI Protein BLAST