Transcript Information: S_Transcript_120834.p1


Annotated TAIR IDAT3G07850.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:2505813-2507438 | Reverse length=444
E-Value2E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2282923647006
Replicate 22.7154202532326
Replicate 31.1349376051447
Condition 2: 8 Hour
Replicate 13.4448707435369
Replicate 21.3767291470601
Replicate 33.7712653454967
Condition 3: 24 Hour
Replicate 10.67215026124905
Replicate 20.17433701212575
Replicate 30.7760629047728


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_120834.p1 GENE.S_Transcript_120834~~S_Transcript_120834.p1 ORF type:complete len:130 (+),score=16.99,Glyco_hydro_28|PF00295.13|5.4e-17 S_Transcript_120834:375-764(+)
ATGACTGTGTTTCGATGGGAGATGGAGCCAAGCAGATCCATGTTGAGGGAGTCACCTGTGGGCCTTGGCAGGTACCCGAATGAGTCCCCCGTCGAAGGAGTTACTATCAAGGGCTGCAACATAAGCAACACAGAAAATGGTGTCAAGATCAAGTCATGGCTAAACTCTTATGAAACTACTGCTGCAGACTTGCACTTTGAGGACATTTCAGTCAACAATGTTCTCACCCCTATAGTTGTCGATCAAGAGTATTGTCCATACAACCATTGCAAAGCTAAGGTGGCATCTCAACTCTCTCATTGGACTAAAGTCATAGCCCTGTTTGATAGTACAAAAGACTTCAACTTTAAGTTCACTTTAGATTTAGTTGATCACTTGGATTCAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_120834.p1 GENE.S_Transcript_120834~~S_Transcript_120834.p1 ORF type:complete len:130 (+),score=16.99,Glyco_hydro_28|PF00295.13|5.4e-17 S_Transcript_120834:375-764(+)
MTVFRWEMEPSRSMLRESPVGLGRYPNESPVEGVTIKGCNISNTENGVKIKSWLNSYETTAADLHFEDISVNNVLTPIVVDQEYCPYNHCKAKVASQLSHWTKVIALFDSTKDFNFKFTLDLVDHLDSI*

Click here to download the sequence:
Link to NCBI Protein BLAST