Transcript Information: S_Transcript_120836.p1


Annotated TAIR IDAT3G14040.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4648607-4650226 | Reverse length=445
E-Value3E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9998209020656
Replicate 22.6781420850162
Replicate 33.3047677375238
Condition 2: 8 Hour
Replicate 14.4376534763976
Replicate 24.1381454131286
Replicate 33.9428157419619
Condition 3: 24 Hour
Replicate 10.88389701985063
Replicate 21.7030609855059
Replicate 30.43737649257427


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_120836.p1 GENE.S_Transcript_120836~~S_Transcript_120836.p1 ORF type:complete len:173 (+),score=27.37,Glyco_hydro_28|PF00295.13|1.2e-34 S_Transcript_120836:375-893(+)
ATGACTGTGTTTCGATGGGAGATGGAGCCAAGCAGATCCATGTTGAGGGAGTCACCTGTGGGCCTTGGCAGGTACCCGAATGAGTCCCCCGTCGAAGGAGTTACTATCAAGGGCTGCAACATAAGCAACACAGAAAATGGTGTCAAGATCAAGTCATGGCTAAACTCTTATGAAACTACTGCTGCAGACTTGCACTTTGAGGACATTTCAGTCAACAATGTTCTCACCCCTATAGTTGTCGATCAAGAGTATTGTCCATACAACCATTGCAAAGCTAAGACTCCATCCAAGGTGAAGCTGAGCGATGTTAGCTTCAAGAACGTGAGAGGAACAGCAGGAAGCCGAGAGGCGGTGAAGCTAATATGCAGTGAAGGAGCACCCTGTGAGAAGGTGGAACTCACAGACATTGACTTGACATTCAACGGTGGGGAAGCCGTCTCGCTATGTAAAAACGTTAAGCCAGTCACATCAGGCAAGCAGAACCCTCCAGCTTGTGGTGCTCAACCTCTTTCAGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_120836.p1 GENE.S_Transcript_120836~~S_Transcript_120836.p1 ORF type:complete len:173 (+),score=27.37,Glyco_hydro_28|PF00295.13|1.2e-34 S_Transcript_120836:375-893(+)
MTVFRWEMEPSRSMLRESPVGLGRYPNESPVEGVTIKGCNISNTENGVKIKSWLNSYETTAADLHFEDISVNNVLTPIVVDQEYCPYNHCKAKTPSKVKLSDVSFKNVRGTAGSREAVKLICSEGAPCEKVELTDIDLTFNGGEAVSLCKNVKPVTSGKQNPPACGAQPLSA*

Click here to download the sequence:
Link to NCBI Protein BLAST