Transcript Information: S_Transcript_120910.p1


Annotated TAIR IDAT4G24430.1
Annotated Gene NameRhamnogalacturonate lyase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12630018-12632975 | Forward length=646
E-Value1E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.63364288655192
Replicate 20.52530451327416
Replicate 30.73185460649209
Condition 2: 8 Hour
Replicate 10.50774738850317
Replicate 20.53266306285063
Replicate 30.67669357476131
Condition 3: 24 Hour
Replicate 10.69348836478077
Replicate 20.5396145613416
Replicate 30.80069982238464


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_120910.p1 GENE.S_Transcript_120910~~S_Transcript_120910.p1 ORF type:3prime_partial len:126 (+),score=19.49,CBM-like|PF14683.2|4.7e-32 S_Transcript_120910:2-376(+)
ATGGGTGAGCTTGTATATGAACCGCCAAGAGATGGACCGACCTTGTGGGAGATTGGTATCCCTGATAAGACAGCTCGAGAATTTTACATCCCTGATCCTGATCCTGAGTATGTCAATAAACTCTACGTCAACCATCCTGACAGGTTTAGACAGTATGGTCTTTGGGATAGATATTCCTACTTATATCCTGATAAAGATCTTGTTTATACAGTTGGTGAAAGTGATTACCAGAAGGACTGGTTTTTTGCTCAGGTTACCAGGAGGAAAGGCAACACGTACCAAGGAACAACATGGCAAATCAAGTTCAAACTTGACATTGTAAATCAGAATGGTGTGTATAAGCTGCGATTGGCACTCGCAACAGCAAATATGGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_120910.p1 GENE.S_Transcript_120910~~S_Transcript_120910.p1 ORF type:3prime_partial len:126 (+),score=19.49,CBM-like|PF14683.2|4.7e-32 S_Transcript_120910:2-376(+)
MGELVYEPPRDGPTLWEIGIPDKTAREFYIPDPDPEYVNKLYVNHPDRFRQYGLWDRYSYLYPDKDLVYTVGESDYQKDWFFAQVTRRKGNTYQGTTWQIKFKLDIVNQNGVYKLRLALATANMA

Click here to download the sequence:
Link to NCBI Protein BLAST