Transcript Information: S_Transcript_120922.p1


Annotated TAIR IDAT3G49601.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf21 (InterPro:IPR013170); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18387504-18389279 | Reverse length=591
E-Value0.001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5493870582126
Replicate 21.5111499696928
Replicate 31.7684815422631
Condition 2: 8 Hour
Replicate 11.8988361241283
Replicate 21.3790865599832
Replicate 31.6789879962828
Condition 3: 24 Hour
Replicate 11.4214136517852
Replicate 21.3194684821846
Replicate 30.86376864401082


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_120922.p1 GENE.S_Transcript_120922~~S_Transcript_120922.p1 ORF type:complete len:292 (+),score=93.78 S_Transcript_120922:337-1212(+)
ATGGAGAATGGAGAATCATCATCACAACTTTCAACTTCGTTTTCAATCCCTCGAGGGGGACCCATTTTCTTACCTGACCTTGTAAGTCCTCTCATTAGGGTTTCTACTTTCGAATGCGATGTTTTTCTTGAATTGGAGAGCTTGAAGGCTGAATTAGCTGATTTTGACGACAACAACGACGAAGAAGAAGATATTTCGGTTGAGGAGCTTAAAATTTATAGCGAGGAAGAGCTGGTTAGTGAGGCTATGAAGATTGCATTCGAGGATGATGAGGCTGGGCCTTCTTCAGACCTCATGGAAAATCCATGCAATTCACGAGCTGCTGCAGATGATGATGGAATATTGGATCTTGATAAATCAACTTCACTTGGATCCTCAAATGGCTTTTCATGTGAAAAAAGTCATGATGGAGTAGCCAATGGTGCAAACTTGATGAAGAACGAGGGAACAACTAATGCTAAACCTCTCTTAACGTACAAGAGGAGGAAAAAAATAAATCAGGATGGAGTAGAGAATGATCCCAATTTGAAGAAGATGGAAAGAGGTGAAGCTAAGGATAGCTCCAAGAAGAGGATCACGAAAGAAACAAGTCTCGAGGTAGTAGAGAATGGTTCTAATTTAAAGAAGAGGAAGAGAAGAGCTAATGGTGAGGAAAACTGCAAGAAGAGGATGAAGAAAGATACAAGTCTCAAAGAAATAGAGAATGGTGCCAATTTGAAGGAGGGGAAGAGAAGAGTTGAAGTTAAGGCTAAATCCAAGACCACGAGGAAGAAGGAACTGGTAGTCCATGACAAAGATAAAGCAATTGATCTTGGGGGTATTGTAGGAGGCATATCCATCCAACAACATGCAAAAAGAAAAATGGAAATTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_120922.p1 GENE.S_Transcript_120922~~S_Transcript_120922.p1 ORF type:complete len:292 (+),score=93.78 S_Transcript_120922:337-1212(+)
MENGESSSQLSTSFSIPRGGPIFLPDLVSPLIRVSTFECDVFLELESLKAELADFDDNNDEEEDISVEELKIYSEEELVSEAMKIAFEDDEAGPSSDLMENPCNSRAAADDDGILDLDKSTSLGSSNGFSCEKSHDGVANGANLMKNEGTTNAKPLLTYKRRKKINQDGVENDPNLKKMERGEAKDSSKKRITKETSLEVVENGSNLKKRKRRANGEENCKKRMKKDTSLKEIENGANLKEGKRRVEVKAKSKTTRKKELVVHDKDKAIDLGGIVGGISIQQHAKRKMEIA*

Click here to download the sequence:
Link to NCBI Protein BLAST