Transcript Information: S_Transcript_121050.p1


Annotated TAIR IDAT5G64320.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25723247-25725439 | Reverse length=730
E-Value3E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5228147845744
Replicate 21.6231480055937
Replicate 31.3819488890981
Condition 2: 8 Hour
Replicate 12.64388354068
Replicate 22.2554724786645
Replicate 32.0328465018375
Condition 3: 24 Hour
Replicate 11.8452081422573
Replicate 22.2849074341277
Replicate 31.5119481659743


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_121050.p1 GENE.S_Transcript_121050~~S_Transcript_121050.p1 ORF type:complete len:734 (+),score=122.48,PPR_2|PF13041.2|17,PPR_2|PF13041.2|17,PPR_2|PF13041.2|0.075,PPR_2|PF13041.2|2.6e-07,PPR_2|PF13041.2|3.1e-09,PPR_2|PF13041.2|0.0071,PPR_2|PF13041.2|5.7e-05,PPR_2|PF13041.2|0.7,PPR_2|PF13041.2|6.7e+02,PPR_2|PF13041.2|5.3e-07,PPR_2|PF13041.2|4e-07,PPR_2|PF13041.2|0.0007,PPR_2|PF13041.2|0.041,PPR_2|PF13041.2|1.5,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|0.083,PPR_2|PF13041.2|1.4e-08,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|0.027,PPR|PF01535.16|6,PPR|PF01535.16|5.6,PPR|PF01535.16|0.011,PPR|PF01535.16|0.049,PPR|PF01535.16|0.18,PPR|PF01535.16|0.66,PPR|PF01535.16|7,PPR|PF01535.16|0.0085,PPR|PF01535.16|0.016,PPR|PF01535.16|0.052,PPR|PF01535.16|1.4,PPR|PF01535.16|0.83,PPR|PF01535.16|19,PPR|PF01535.16|3.1,PPR|PF01535.16|0.0042,PPR_1|PF12854.3|9.6e+03,PPR_1|PF12854.3|67,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|32,PPR_1|PF12854.3|3,PPR_1|PF12854.3|0.00037,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|4.7,PPR_1|PF12854.3|4.2e+02,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|56,PPR_1|PF12854.3|3e+03,PPR_1|PF12854.3|0.25,PPR_1|PF12854.3|62,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|0.0073,PPR_3|PF13812.2|7.9,PPR_3|PF13812.2|3e+02,PPR_3|PF13812.2|11,PPR_3|PF13812.2|5e+02,PPR_3|PF13812.2|0.044,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|39,PPR_3|PF13812.2|21,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|8.6e+02,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|36 S_Transcript_121050:281-2482(+)
ATGCAATGGTGTTTGCTCTCAATGGCTGTAAAGATCACACCTTTAGTGTTTTCTAGGAGAATCCCTAGGTGGTTTCTGTCAATTACGTCTTTTTCCTCAGTATCAAGTGCAGTTTACACTCAGAATTACTCAGAAACCTGCCAAAAGGCGCCAAACAGAGCTGAGATTGACCCTAGTGTACAATATCTGAAAAACAGGCTGTGCCCAGATGAGTTAATCCGGGTTTTGGATAGAACTCATGATTTGAAATCAGCCCTCAAGCTGTTCAAATGGGCTTCTCTTCAAAAACAGTATAGTCACACAGCTAGTACATATTCTAGTATCATATTGAAGCTAGGTTTTGCTGGAAATGTGGATGAAATGGAGGGCTTCTGTAAGGAGATGATGAGGGATAAATGCCCAGGTTCTGAAGAAGCTCTTGGTGTTCTTGTGGATAAGTTTGTTAGGAATGGTAGGTTATGTGAAGCTATGAGGGTATTATTCGCTTTGAATGGTAGTGGGTGTAAGTCTGATATAGATACATGGAATGTTTTATTAAGTGCCCTTGTTGAGGCGAATAGAGATTTCCGTGATGTGGTGTTGGTTTATAAGGAGATGGTGAAATCAAGAATTCTTCCTAGTGTTGACACTTTGAATTATCTTATAAAAGCTTTATTTGATGCCGACATGGTCAGTAATGCCTTGGATCAATTCAGGAAAATGAGGAGAAAAGGTTGTGTTCCTAATTGTAGGACATTTGAGATTGTTATATGTGGCCTTGTGGCTTCAAATAGGGTGGATGAATCATTAGGTGTGATGAATGAGATGTTTGAAAATGGGGTTGATCTTGATGAGAGTTTCTATAATGATGTTATACCACTGCTGTGTGGAGAGAATAAACTTGGAGAAGCAATGAGGCTGTTTGAAATGATGAGAGTTTCACAATTCAAGCCTGATTATTGTGTTTACGAATCTCTTGTTAAATGTTTGAGTGCGCATCGTCGTTTCAGTGAAGCGACTGAGCTCTTTTGTGAGTATAGGAATGGTGGGTTTAGTCCTTCAAAGGACATGCTCATGGATGTTATAGTTGCATACAGTAAATTAGGGGATCTTGATGAGGCAGGGAATTTGTTAGATAACAATAAAATCCTTGACCCTTTTCCTTATAATGCACTGCTCCGGGGTTACTGTGATGCTCATAACTTCCTGGCTGCAAAAGATTTACTTTGTAGAATGCTCCTGCTGAATGTTGCTGATACTTTATCATTTACAATTCTAATTCAAGGGCTTTGTAACATAAACAATGTTAAACATGCTTATGAGCTTATTGGTAAAATGTTTGTCCTGTCATTTTGGCCTGACAGTGCGACGTACTCTGCTCTTGTCATTGGCAATTGTAATTTATGCAAATATGAGGATGCTATGAAGCTGTTTCAACAAGTTCGGGTGAAAGATTTGATCTCGGGTCCTAATTCTTATACCAAGCTGATTGAGGGACTTTGCAATGTAGGAAGGTCTCAGGATGCTTCTGAAGTATATATGTACATATTGATGCAGAATGCTAAGCTTCCTTGTTCTTTATTTAGCAGTTTGATCAAAAGAATTTGTGCAACAGGAAGGGTGGATGAAGCAATCAAGCTCCTAAAGTTTGGTCATCAGTTTGAGAATCCTGTCAGTGTTTCCACTTATGCAACCATAATGCGTGCCTTATTCAAAGCCAACAGGTCGAAGGATACCCTGGTTTTTTACTCGCAAATTTTGAGACGTGGTCTAGTTTTTGATGTGGAGATAAATTGCATTTTGATCCAATGCATGAGTTCCTTGTCTCAAACGAACGATTGTATTTTCATTTTCAAGCAGATGGTTAGTGAAGGTTTCTTCCCTGACAGTGAAACACTTGCTATCCTTTTGTCCCATTTAGCCAGACATTCTCAGTTACATGCAGTATGGACAGTAATAAATAAGCTTTATGAGGAAGATGAGGTTCTTGATCCAGCAGTATACAACTTGCTGATCAATGGTCTATGGAATGAGGGTTACAAATCTGAGGCCAGTCGGCTGCTCGATACGATGTTGGAGAAGGGTTGGGTTCCAGATGCCCATACTCATGGAGTGCTGATTGGATCTCTCGGTAAGGCAGAAGAGCAAAAATTCAAACATGACAATGTGGTTATGACAGATGAAGTTAGCAGCATACTCTCAGAGGGGTTAGCAGAAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_121050.p1 GENE.S_Transcript_121050~~S_Transcript_121050.p1 ORF type:complete len:734 (+),score=122.48,PPR_2|PF13041.2|17,PPR_2|PF13041.2|17,PPR_2|PF13041.2|0.075,PPR_2|PF13041.2|2.6e-07,PPR_2|PF13041.2|3.1e-09,PPR_2|PF13041.2|0.0071,PPR_2|PF13041.2|5.7e-05,PPR_2|PF13041.2|0.7,PPR_2|PF13041.2|6.7e+02,PPR_2|PF13041.2|5.3e-07,PPR_2|PF13041.2|4e-07,PPR_2|PF13041.2|0.0007,PPR_2|PF13041.2|0.041,PPR_2|PF13041.2|1.5,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|0.083,PPR_2|PF13041.2|1.4e-08,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|0.027,PPR|PF01535.16|6,PPR|PF01535.16|5.6,PPR|PF01535.16|0.011,PPR|PF01535.16|0.049,PPR|PF01535.16|0.18,PPR|PF01535.16|0.66,PPR|PF01535.16|7,PPR|PF01535.16|0.0085,PPR|PF01535.16|0.016,PPR|PF01535.16|0.052,PPR|PF01535.16|1.4,PPR|PF01535.16|0.83,PPR|PF01535.16|19,PPR|PF01535.16|3.1,PPR|PF01535.16|0.0042,PPR_1|PF12854.3|9.6e+03,PPR_1|PF12854.3|67,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|32,PPR_1|PF12854.3|3,PPR_1|PF12854.3|0.00037,PPR_1|PF12854.3|0.0026,PPR_1|PF12854.3|4.7,PPR_1|PF12854.3|4.2e+02,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|0.00016,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|56,PPR_1|PF12854.3|3e+03,PPR_1|PF12854.3|0.25,PPR_1|PF12854.3|62,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|0.0073,PPR_3|PF13812.2|7.9,PPR_3|PF13812.2|3e+02,PPR_3|PF13812.2|11,PPR_3|PF13812.2|5e+02,PPR_3|PF13812.2|0.044,PPR_3|PF13812.2|2.3e+02,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|39,PPR_3|PF13812.2|21,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|8.6e+02,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|36 S_Transcript_121050:281-2482(+)
MQWCLLSMAVKITPLVFSRRIPRWFLSITSFSSVSSAVYTQNYSETCQKAPNRAEIDPSVQYLKNRLCPDELIRVLDRTHDLKSALKLFKWASLQKQYSHTASTYSSIILKLGFAGNVDEMEGFCKEMMRDKCPGSEEALGVLVDKFVRNGRLCEAMRVLFALNGSGCKSDIDTWNVLLSALVEANRDFRDVVLVYKEMVKSRILPSVDTLNYLIKALFDADMVSNALDQFRKMRRKGCVPNCRTFEIVICGLVASNRVDESLGVMNEMFENGVDLDESFYNDVIPLLCGENKLGEAMRLFEMMRVSQFKPDYCVYESLVKCLSAHRRFSEATELFCEYRNGGFSPSKDMLMDVIVAYSKLGDLDEAGNLLDNNKILDPFPYNALLRGYCDAHNFLAAKDLLCRMLLLNVADTLSFTILIQGLCNINNVKHAYELIGKMFVLSFWPDSATYSALVIGNCNLCKYEDAMKLFQQVRVKDLISGPNSYTKLIEGLCNVGRSQDASEVYMYILMQNAKLPCSLFSSLIKRICATGRVDEAIKLLKFGHQFENPVSVSTYATIMRALFKANRSKDTLVFYSQILRRGLVFDVEINCILIQCMSSLSQTNDCIFIFKQMVSEGFFPDSETLAILLSHLARHSQLHAVWTVINKLYEEDEVLDPAVYNLLINGLWNEGYKSEASRLLDTMLEKGWVPDAHTHGVLIGSLGKAEEQKFKHDNVVMTDEVSSILSEGLAET*

Click here to download the sequence:
Link to NCBI Protein BLAST