Transcript Information: S_Transcript_121224.p1


Annotated TAIR IDAT5G52450.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21289042-21291749 | Reverse length=486
E-Value3E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.51015337831017
Replicate 20.28195258220466
Replicate 30.17676743850096
Condition 2: 8 Hour
Replicate 10
Replicate 20.28590221903804
Replicate 30.13620349907336
Condition 3: 24 Hour
Replicate 11.5354231207446
Replicate 20.1448166873888
Replicate 30.40290805758971


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_121224.p1 GENE.S_Transcript_121224~~S_Transcript_121224.p1 ORF type:5prime_partial len:313 (+),score=27.96,MatE|PF01554.14|2e-33 S_Transcript_121224:1-939(+)
GAAATGGAGAGCAAAGAAAACACGCACCTTGAAAATCTGTTGATCAAAACCGAGGAAGGAAGAAGAAATGAAATTAGGTGGTTTGATAACACTCGACAATCCGAAATTTTGGAAGAAGCAAAGAGGCAAGTATGGCTAGCAGGGCCTCTAATAGCAGTGAGCTTATTGCAGTATTGTATTCAAATCATTTCAATTATGTTCGCTGGACATCTTGGGGTGCTGCCTTTATCAAGTGCTTCCATTGCCACTTCTTTTTCTTCTGTCACCGGTGCTAGCGTTCTGGCGGGCATGGGAAGTGCATTGGAGACGCTATGTGGACAATCCTACGGAGCTAAACAATACAAAATGCTTGGGATTTACACACAAAGAGCCATGATAAGCCTTCTAGCCACAAGCATCCCTCTAGCTATGATCTCATATTACACTGACAAAATTCTCATTCTCTGTGGCCAAAACCATGACATAGCAAAGGGTGCTGGAATTTTCAACCGTTGGATGATTCCATCCCTTTTTGCTTACTCCCTTCTTCAATGTCTCAACAGATTTCTTCAAACTCAGAACATTGTCTTCCCAATGCTCATAAGTTCGGGTGTAACTGCTTCTCTACATGTTCTCGTTTGTTGGGTTCTCGTTTTCAAGCTTGGTCTCGGGATCAAGGGAGCTGCCATGGCCAACAATGTGTCATATAGCCTTAATGTTTTGTTGTTGGGAATTTATGTTGTGTCTTCCCCTGCTTGCCAGATCACTTGGACCGGGTTCTCAAGCGAAGCATTACATGATCTATGGAGTTATCTTAAACTTGCTATTCCTTCTGCAACCATGATTTGGTATTGTTGTTCATCATCTCAACAGTCATTCACATATTTCCTGATTAATCAGTTTCTTGAACTTAAATTGTACTTCATCCGTCCCTATTTGAAGATGACACAATTTTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_121224.p1 GENE.S_Transcript_121224~~S_Transcript_121224.p1 ORF type:5prime_partial len:313 (+),score=27.96,MatE|PF01554.14|2e-33 S_Transcript_121224:1-939(+)
EMESKENTHLENLLIKTEEGRRNEIRWFDNTRQSEILEEAKRQVWLAGPLIAVSLLQYCIQIISIMFAGHLGVLPLSSASIATSFSSVTGASVLAGMGSALETLCGQSYGAKQYKMLGIYTQRAMISLLATSIPLAMISYYTDKILILCGQNHDIAKGAGIFNRWMIPSLFAYSLLQCLNRFLQTQNIVFPMLISSGVTASLHVLVCWVLVFKLGLGIKGAAMANNVSYSLNVLLLGIYVVSSPACQITWTGFSSEALHDLWSYLKLAIPSATMIWYCCSSSQQSFTYFLINQFLELKLYFIRPYLKMTQFF*

Click here to download the sequence:
Link to NCBI Protein BLAST