Transcript Information: S_Transcript_121509.p1


Annotated TAIR IDAT4G20050.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)QRT3
Annotation TypeOrtholog
Chromosome Positionchr4:10849911-10852090 | Reverse length=481
E-Value2.1E-193
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8539375565623
Replicate 22.5473670917679
Replicate 32.4542192831406
Condition 2: 8 Hour
Replicate 16.1347013241068
Replicate 24.9034188799401
Replicate 39.3439331967041
Condition 3: 24 Hour
Replicate 11.9664670069811
Replicate 23.6368543038366
Replicate 33.3563581595849


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_121509.p1 GENE.S_Transcript_121509~~S_Transcript_121509.p1 ORF type:complete len:511 (+),score=59.84,Pectate_lyase_3|PF12708.3|3e-09,Pectate_lyase_3|PF12708.3|3.8e+03 S_Transcript_121509:535-2067(+)
ATGAAGGGCACATTAATGGCAACAAAAGCTCTTCTTCTTCTCTTTAATTTCCTCTTGATTATGGAATTAGTTGGTCACCTTATGGTTATTGAAGTTTATGGAGAGAATTCTTATGATATTGGTGGTGCTGATCATATTCTAAGGAAAATGCAGGCTTTCAAAGCCTCTCTTGTTAGACGTCAAGCTCAATCTATTGCTGCTCCTCCCAATACGTTGATTTCTCCCTCTCCTGGCTTTGCTCCTTCTTCGAATAGTGCACGTGTGTATCACGTGACATCATACGGGGCGGATCCGACAGGGAAAACGGACAGCACAGAGGCGCTTCGAAAGGTGTTTTCAGACGTGACAAATAGTCCAAGCAATGGGTATTTGATGGATGGGATTAGTAATTTGGGTGGCGTAGAGATCAATCTTGATGGTGGAGATTACTTGATTAGCCGCCCTCTTCAATTTCCGACTGCCCGTATTGGAAACATTCTGATACATGGAGGGACGCTACGGGCATCAGATAATTTTCCTACAGATGGTTATCTTGTAGAACTTGCATCAGCATCTTCATCATCAGCTCAAAAACAAGACATTACAGATTCTGTGGACCAAAGTCTTAGCTCCTCTTCATCCTCTTACAACTTTGAGTACATAACCTTTAGGGACCTAATGCTGGATTGCAACTTCAGAGGTGGTGGCATTTCAATAATCAACTCCCTTAGAACTGGCATTGACAATTGTTACATTGCACATTTTACTACAGAAGGGATTCGAGTCCAATCCGGGCATGAAACGGTAATTCGAAGCTCATTCATAGGCCAACACATAACTGCTGGTAACGATCCAGGCGAGAGAAATTTCTCCGGCACAGGGATCACCCTTATGGGCAACGACAATGTCGTTAGTGAAGTGGTCATTTTCTCAGCTGATACAGGAATAATGGTTTCAGGCCAAGCCAATCTTATTTCCGGAATTCATTGCTATAACAAAGCTGTTGGTTTCGGTGGCAAGGGGATATATCTGAAGCTACCTGGTTTGACTCAGACCAGGATCGTAAACTCGTATCTTGATTACACAAGTATAGTTGCAGAGGACCCTGTTCAGCTCATAATTTCCAACAATTTCTTCTTAGGAGACGCCTTCGTTTCATTGAAATCGGTCAAGGGAATCGCAAACGGAGTGAACATTGTTGACAATATGTTTTCTGGGTCTGGAAAAGGGGTTGACATTGTGCAGTTAGATGGGTCGTTTGGGAATATTGACCAGGTTCTTGTTGACAGGAACAGTGTCAATGGGATGAATAGAAAGGCGACTATAGCGAGAATCGAAGTACTAGGTAATGGGAGTTCCTGGACAGCAGATTTTAATGGAGTTCTTTTGTTCCCAAACCTCATAAAACATGTGCAATACACACTAAGTGCCACGGGTGATTCTTTCCCCATGTATGCTTTGAGAAATGTTTCGGATAATCGGGTGTTGATCCAGTCGAATTTCGCTGTTCCTACCAGTGTGTATGTTATGGTTGATCAAGGATTCGGAAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_121509.p1 GENE.S_Transcript_121509~~S_Transcript_121509.p1 ORF type:complete len:511 (+),score=59.84,Pectate_lyase_3|PF12708.3|3e-09,Pectate_lyase_3|PF12708.3|3.8e+03 S_Transcript_121509:535-2067(+)
MKGTLMATKALLLLFNFLLIMELVGHLMVIEVYGENSYDIGGADHILRKMQAFKASLVRRQAQSIAAPPNTLISPSPGFAPSSNSARVYHVTSYGADPTGKTDSTEALRKVFSDVTNSPSNGYLMDGISNLGGVEINLDGGDYLISRPLQFPTARIGNILIHGGTLRASDNFPTDGYLVELASASSSSAQKQDITDSVDQSLSSSSSSYNFEYITFRDLMLDCNFRGGGISIINSLRTGIDNCYIAHFTTEGIRVQSGHETVIRSSFIGQHITAGNDPGERNFSGTGITLMGNDNVVSEVVIFSADTGIMVSGQANLISGIHCYNKAVGFGGKGIYLKLPGLTQTRIVNSYLDYTSIVAEDPVQLIISNNFFLGDAFVSLKSVKGIANGVNIVDNMFSGSGKGVDIVQLDGSFGNIDQVLVDRNSVNGMNRKATIARIEVLGNGSSWTADFNGVLLFPNLIKHVQYTLSATGDSFPMYALRNVSDNRVLIQSNFAVPTSVYVMVDQGFGS*

Click here to download the sequence:
Link to NCBI Protein BLAST