Transcript Information: S_Transcript_121599.p1


Annotated TAIR IDAT4G20940.1
Annotated Gene NameLeucine-rich receptor-like protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:11202728-11206038 | Forward length=977
E-Value5.9E-237
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.274627141402
Replicate 23.6295003546689
Replicate 32.9384152050296
Condition 2: 8 Hour
Replicate 13.5081924485439
Replicate 23.4195312687665
Replicate 33.9760130247634
Condition 3: 24 Hour
Replicate 11.8109747971477
Replicate 21.9082224772831
Replicate 32.9403937777985


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_121599.p1 GENE.S_Transcript_121599~~S_Transcript_121599.p1 ORF type:5prime_partial len:772 (+),score=158.30,Pkinase_Tyr|PF07714.13|5.7e-28,Pkinase|PF00069.21|3.4e-24,LRR_8|PF13855.2|0.077,LRR_8|PF13855.2|13,LRR_8|PF13855.2|1.1e-05,LRR_8|PF13855.2|1.2e+02,LRR_8|PF13855.2|4.4e-11,LRR_4|PF12799.3|52,LRR_4|PF12799.3|0.063,LRR_4|PF12799.3|0.036,LRR_4|PF12799.3|0.0082,LRR_4|PF12799.3|0.07,LRR_4|PF12799.3|0.16,LRR_4|PF12799.3|0.00092,LRR_4|PF12799.3|4.3e+03,LRR_1|PF00560.29|4.5,LRR_1|PF00560.29|3.2,LRR_1|PF00560.29|50,LRR_1|PF00560.29|39,LRR_1|PF00560.29|3,LRR_1|PF00560.29|1.8e+02,LRR_1|PF00560.29|5.1,LRR_1|PF00560.29|7.6,LRR_1|PF00560.29|1.7 S_Transcript_121599:1-2316(+)
TATAATCAGTTGTCTGGAGATTTGCCAGAATTTAACTTTGTGTATGATCTTGAGGTCCTCAGGTTGAGCAACAACAAGTTCTCAGGCTTTGTTCCGAATGATTTGCTGAAGGGAGATCCTCTTCTTCTTACGGAATTGGATTTGAGTGGCAATAATCTCACAGGCCCTATAAGCATGATCACATCAACAACACTTCGGGTTCTTAATATGTCGTCTAATGGACTTTCTGGTGAACTGCCGCTTCTGACAGGAGACTGTGCAGTTCTTGATTTATCAAATAATCAATTTGAAGGAAACTTGACGAGAATGACCAAGTGGACAAACATTGAATTCCTTGACCTTAGCCAAAATCGCTTTTCAGGTCCTATTCCTGAGACAAAATCTCCGTTTTTGCATCTAAATCATCTCAATATTTCCCGTAATTCTCTAAGTGGTTTTCTACCAAGTGATCTAACACAATACCCAAAGCTTGCTGTCCTGGACCTTAGTTTCAATCATATAAATGGATCCCTTCGGACTAAATTGTTGACAATGCCAACCTTGCAAGAACTTCATCTTGCAAGCAATTCCTTTGATGGAAATATTGAATTCACTCCTCCTCCTTCGGGTGAATCTAACCTCAGATTGCTTGATCTTTCTTATAATCGTTTGGATGGATACTTCCCAGATCGATTTGAGTCACTGACTGGTCTTGAAGTACTTAACCTTGCTGGAAATAATCTTTCTGGTTCTTTGCCAACTTCCATGAACAACATGAGCTCCTTGACCTCTCTGGATATTTCACAGAATCATTTCACTGGTTCTTTGCCAAGTAACCTTTCTAGTAACATTCAAAGTTTTAATTCATCTTACAATGGTCTTTCTGGGGTTGTCCCTGAAAATCTAAGAAAATTTCCACGCTCAAGTTTCTTCCCGGGGAATTATAAACTACAATTTCCTAATGCACCCCCTGGACCAGAAGGTGCTGCTGGTGGAAAATCCAAGGGGAGATCAATGAAGACCCTGATTAAAGTGATAATTATTGTAGCATGCGTGGTTGGCTTTTTCATTTTGATTTTGCTTGCTATATTCATACATTACATCCGCATCTCTAGAAAACCTTTGTCCGATGATGTTATCAAGAGAGACAACCAGAGAAAGGTGCCATCAAATCCTTCTGGTCTTGGTGGAAGGGACAATCCTCGTAATTTGGTTATTTCTGCTGAGGATATTATAACCACCCGGAAGGGATCCTCATCTGAGATAATAAGCCCTGATGAGAAGGCAGCTGCTGTAACCGGTTTCTCCCCATCAAAAAACAGTCAGTTATCTTGGTCGCCAGAATCTGGAGATTCTTTCACTGCGGAGAACCTACCCAAACTTGAAGTCAGGTCACCTGATCGACTTGCAGGCGAGTTGTATTTCCTTGATGATACAATATCATTGACACCTGAGGAACTATCAAGAGCTCCAGCTGAGGTCTTGGGTCGTAGCAGCCACGGAACTTCTTACAGGGCTACTTTGGAAAATGGATTGTTCTTAACTGTTAAGTGGCTGAGAGAAGGTGTCGCAAGACCAAAGAAGGATTTTTCCAAGGAAGCAAGAAAATTTGCAAACATCAGGCATCCAAATGTTGTTGCATTGAGAGGATACTATTGGGGGCCTACTCAGCATGAGAAGCTAATTCTTTCAGATTATGTCTCACCTGGAAGTCTTGCAAGCTTTCTTTATGACCGACCAGGGAGAAGAGGTCCACCACTAACTTGGGCTCAGAGACTTAAGATTGCAGTGGATGTTGCACGTGGTCTAAACTATCTCCACTTTGATCGTGCTCTTCCACATGGTAATCTGAAAGCAAACAACATATTGCTGGATGGTTCCGACGTCAATGCACGAGTTGCAGATTACTGTCTTCATCGCCTCATGACCCAAGCTGGCACAATTGAACAGATTCTGGATGCAGGTGTGCTAGGATACCGAGCACCAGAACTGAATGCATCTAAGAAGCCACTACCATCATTTAAATCGGATGTATATGCCTTTGGAGTTATATTGCTGGAATTGTTGACCGGAAGATGTGCTGGTGAAGTTGTTTCTGGAGAGGAAGGAGGTGTTGATTTGACAGATTGGGTTAGGTTGCGGGTGGCTGAAGGACGAGGCTCTGATTGTTTTGACTCGGTCCTGACTGCAGATATGGCAAATCCTTCCACAGCCAAGGCAATGAAGGAGGTCCTTGGAATAGCTTTGCGCTGTATCCGCTCAGTTTCAGAGAGGCCAGGTATCAAGACTATATATGAGGATCTTTCATCGATTTATTTTGTGGAGTTTAGTTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_121599.p1 GENE.S_Transcript_121599~~S_Transcript_121599.p1 ORF type:5prime_partial len:772 (+),score=158.30,Pkinase_Tyr|PF07714.13|5.7e-28,Pkinase|PF00069.21|3.4e-24,LRR_8|PF13855.2|0.077,LRR_8|PF13855.2|13,LRR_8|PF13855.2|1.1e-05,LRR_8|PF13855.2|1.2e+02,LRR_8|PF13855.2|4.4e-11,LRR_4|PF12799.3|52,LRR_4|PF12799.3|0.063,LRR_4|PF12799.3|0.036,LRR_4|PF12799.3|0.0082,LRR_4|PF12799.3|0.07,LRR_4|PF12799.3|0.16,LRR_4|PF12799.3|0.00092,LRR_4|PF12799.3|4.3e+03,LRR_1|PF00560.29|4.5,LRR_1|PF00560.29|3.2,LRR_1|PF00560.29|50,LRR_1|PF00560.29|39,LRR_1|PF00560.29|3,LRR_1|PF00560.29|1.8e+02,LRR_1|PF00560.29|5.1,LRR_1|PF00560.29|7.6,LRR_1|PF00560.29|1.7 S_Transcript_121599:1-2316(+)
YNQLSGDLPEFNFVYDLEVLRLSNNKFSGFVPNDLLKGDPLLLTELDLSGNNLTGPISMITSTTLRVLNMSSNGLSGELPLLTGDCAVLDLSNNQFEGNLTRMTKWTNIEFLDLSQNRFSGPIPETKSPFLHLNHLNISRNSLSGFLPSDLTQYPKLAVLDLSFNHINGSLRTKLLTMPTLQELHLASNSFDGNIEFTPPPSGESNLRLLDLSYNRLDGYFPDRFESLTGLEVLNLAGNNLSGSLPTSMNNMSSLTSLDISQNHFTGSLPSNLSSNIQSFNSSYNGLSGVVPENLRKFPRSSFFPGNYKLQFPNAPPGPEGAAGGKSKGRSMKTLIKVIIIVACVVGFFILILLAIFIHYIRISRKPLSDDVIKRDNQRKVPSNPSGLGGRDNPRNLVISAEDIITTRKGSSSEIISPDEKAAAVTGFSPSKNSQLSWSPESGDSFTAENLPKLEVRSPDRLAGELYFLDDTISLTPEELSRAPAEVLGRSSHGTSYRATLENGLFLTVKWLREGVARPKKDFSKEARKFANIRHPNVVALRGYYWGPTQHEKLILSDYVSPGSLASFLYDRPGRRGPPLTWAQRLKIAVDVARGLNYLHFDRALPHGNLKANNILLDGSDVNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELNASKKPLPSFKSDVYAFGVILLELLTGRCAGEVVSGEEGGVDLTDWVRLRVAEGRGSDCFDSVLTADMANPSTAKAMKEVLGIALRCIRSVSERPGIKTIYEDLSSIYFVEFSF*

Click here to download the sequence:
Link to NCBI Protein BLAST