Transcript Information: S_Transcript_121717.p1


Annotated TAIR IDAT3G24320.1
Annotated Gene NameMUTL protein Homolog 1
Annotated Gene Symbol(s)MSH1, CHM1, ATMSH1, CHM
Annotation TypeOrtholog
Chromosome Positionchr3:8823229-8829571 | Reverse length=1118
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0734174654802
Replicate 22.5093286460866
Replicate 32.8882325100302
Condition 2: 8 Hour
Replicate 13.3023570307371
Replicate 23.3861153234232
Replicate 33.5619657852593
Condition 3: 24 Hour
Replicate 12.484544928939
Replicate 22.6569997823539
Replicate 32.625917134041


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_121717.p1 GENE.S_Transcript_121717~~S_Transcript_121717.p1 ORF type:complete len:1143 (+),score=237.59,MutS_V|PF00488.17|2.1e-40,MutS_I|PF01624.16|3.6e-09 S_Transcript_121717:168-3596(+)
ATGTACTGGATTAGTACTATGAAAGCTGTCGCGGTTTCGGTTTCGGTTTCGCTACCGAGATGGCGACCTCTAGCGCTTCTTCTCCGTTCGCACGTCAATGGCTACTCTCCTCTCTCCTCTCCTCCGTTTTTCCTAAACAGGCAAAATGGACAAATCCGTTGTTTCAGGGACAAGAAAGGTCCAAAAGGAGCAACGAGGACAGCCAAAAAAGTAAAGGACTGGAGAAATGCTTTGGACGAAAAGGATATTTCCCATATTTTATGGTGGAAGGAGAGGTTGGAGATGTGCAGAAAACCTTCAACAGTTCAGCTGCTCAAGAGACTTGTTTACTCCAATCTGCTTGGGTTGGATGTTGACCTGAAAAATGGGAGACTAAAAGAAGGAACCCTTAACTGGGAAATGCTGCAATTTAAGTCAAGGTTCCCACGTGAAGTTCTGTTATGTAGAGTTGGGGATTTTTATGAGGCAATAGGTATTGATGCATGTCTTCTCGTTGAATATGCTGGATTAAATCCATTTGGTGGTTTGCGGTCAGATAGTATCCCAAGAGCTGGCTGCCCTGTTGTGAATTTACAACAAACTCTGGATGACCTGACACGCAATGCCTTTTCTGTTTGCATAGTTGAGGAAGTACAGGGTCCAACTCAAGCTCGTTCGAGGAAAGGCCGATTTATATCTGGGCATGCACATCCAGGGAACCCATATGTGTTTGGACATGTTGGTGTTGATCGTGATCTTGATTTTCCAGAACCAATGCCTGTTGTTGGGATATCTCGTTCTGCAAAAGGCTACTCTTTAGTCTCAATCTTGGAGACCTTGAAGACGTTTTCTGTTGAGGATGGTTTAACTGAAGAAGCATTAGTCACAAAGCTTCGTACTTGTCGCTGCCATTATTTGTTTCTTCATGCATCATTGAAACACAATTCTTCAGGAACGTGTCGGTGGGGAGAATTTGGTGAGGGAGGGTTACTGTGGGCAGAATGCAGTTCCCGACACTTTGAATGGTTTGAAGGTGACCCTGTCAAAGAGCTTTTGCTTAAGGTTAAGGAAGTCTATGGTCTTGATGATGAAGTTACATTTAGAGATATTGCAATTCCTTCTAAAGAAAGGCCCCGGCCTTTACATCTAGGAACTGCTACACAGATTGGTGCCATACCAACGGAAGGAATACCTTGTCTGCTGAAAGTATTGCTTCCATCGACTTGCAGCGGCTTACCACTATTATATGTCAGAGATCTCCTGCTCAACCCTCCTGCCTATGACATAGCATCTACAATTCAAGAAATATGCAAACTCATGAGCAACGTGACCTGCTCAATTCCCGAATTCACATGTGTATCATCTGCAAAGCTTGTCAAGTTAATTGAGCTTAGGGAGGCTAATCATATTGAGTTCGGCAGAATAAAAAACGTTGCTGAAGAAATATTACAGTTGCATAATAACTCTGAGCTTTGTGAGATCCTCAAACTATTGATGGATCCTACTTGGGTGGCAACTGGATTGAAGCTTGACTTTGATACTCTGGTGAATGAATGTGAATGGGTTTCACATAGAATTGGTGAGCTGATCTCAGTGGATGGTGAGGTTGATCAGGAAATAAGTTCCTTACCTCTCATTCCAAGTGATTTTTTTGAGGACATCGAGTCCGTTTGGAAAGGACGTGTAAAAAGAAAGTATATGGAAGATTTATTTGAAGAGGTTGAAGAAGCAGCCAAGTCTCTCCAGTTGGCGGTTTCTGAGGATTTCCTTCCAGTTATTTCAAGAATAAGAGCTACCACAGCACCATTTGGTGGTCCCAAGGGCGAAATATTGTATGCTCGGGAGCATGAAGCTGTTTGGTTCAAAGGGAAGCGTTTTGCACCATCCGTATGGGCTGGGACACCTGGGGAAGTACAAATAAAAGAGCTGAAACACGCATTAGATTCAAAAGGGAGGAAAGTTGGGGAGGAATGGTACACCACAGCAAAAGTAGAGGATGCACTGATGAGGTATCATGAAGCCAATGAAAAGGCTAGGGTCAAAGTTCTTGAATTATTGAGGGGGCTGTCAGCTCAGTTACAGTCTAAAATTAATGCGCTCGTCTTTGCCTCCATGTTGCTTATCATTGCAAAGGCCCTTTTTGCCCATGTGAGTGAAGGGAGGAGAAGAAAATGGGTCTTTCCTACACTGGTGGAATTCAGTAGCTCTGAGAATGGAAAGCATTATGATGAAGTCATAAACATGGAGATTAGAGGCCTATCGCCCTATTGGTTTGATGTGTCACAGGGCGATGCTGTGTGTAATACAATCAGGATGGAGTCATTATTTCTTCTAACAGGACCCAATGGAGGTGGTAAATCAAGTCTACTGAGATCAGTTTGTGCAGCTGCTTTACTTGGAATATGTGGCTTTATGGTTCCTGCAGAATCAGCTTTGATTCCTCATTTTGACGCTATTATTCTCCACATGAAATCTTATGATAGTCCTGTTGATGGAAAAAGTTCTTTTCAGATAGAGATGTCAGAGATTCGTTCACTACTATCTGCAACCACATCAAGAAGTCTTGTTCTTATTGATGAAATCTGTCGAGGAACAGAAACAGCCAAGGGAACATGTATTGCTGGGAGTATTGTTGAAACTCTGGATGCAGTTGGCTGTTTGGGTATTGTATCAACTCACTTGCATGGGATATTTGATTTACCACTGAGGACAAAGAAAACTGTTTACAAGGCAATGAGCACAGAATTTGTTGATGGCCAAACTGTCCCAACTTGGAAGTTGATAGATGGAATCTGTAGAGAAAGCCTTGCATTTGAAACTGCCAAGAGAGAAGGTCTATCTGAAACAGTAGTGCAACGAGCCGAAGAATTATATAGTTCAGTTTATGCAAATGAGAAGGGCTTACAAGATAAAAAGCCCAGGGATTCTATTTCTGAAGTAAATGTTAATGATTCTAGTGAAGCTCAGGGCAAGACTAGGACTACCTGTTCTAACATCAACTTGGTTGCACAAATTGAGATCTTAAAGGAAGAGGTTGAAAGTGCCGTTACTGCTTTGTGCCAGAAGAAGATGATTGAACTTTACAAACTGGCGAACTCGTCTCAGATTCCAGTGATTAAATGCATATGTATTGCTGCTAGGGAACAGCCACCTCCATCAACCATAGGTGCTTCAAGTGTTTATGTGATCTTACGGCCTGACAAGAAATTATATGTTGGAGAGACGGATGATCTCCAAGGTAGAGTCCATGCTCATCGATCGAAGGAAGGTATGCAGAATGCTGTGTTCCTTTCTTTCACAGTCCAAGGGAAAAGCGTTGCATGCCAGCTTGAGACCCTTCTGATCAATCAACTCCCAAAACAAGGATTTCATCTCACTAACATTGCTGATGGTAAGCATCGGAATTTCGGTACATCTGATGCCATCTTAGTGTCAGTTACTGCGTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_121717.p1 GENE.S_Transcript_121717~~S_Transcript_121717.p1 ORF type:complete len:1143 (+),score=237.59,MutS_V|PF00488.17|2.1e-40,MutS_I|PF01624.16|3.6e-09 S_Transcript_121717:168-3596(+)
MYWISTMKAVAVSVSVSLPRWRPLALLLRSHVNGYSPLSSPPFFLNRQNGQIRCFRDKKGPKGATRTAKKVKDWRNALDEKDISHILWWKERLEMCRKPSTVQLLKRLVYSNLLGLDVDLKNGRLKEGTLNWEMLQFKSRFPREVLLCRVGDFYEAIGIDACLLVEYAGLNPFGGLRSDSIPRAGCPVVNLQQTLDDLTRNAFSVCIVEEVQGPTQARSRKGRFISGHAHPGNPYVFGHVGVDRDLDFPEPMPVVGISRSAKGYSLVSILETLKTFSVEDGLTEEALVTKLRTCRCHYLFLHASLKHNSSGTCRWGEFGEGGLLWAECSSRHFEWFEGDPVKELLLKVKEVYGLDDEVTFRDIAIPSKERPRPLHLGTATQIGAIPTEGIPCLLKVLLPSTCSGLPLLYVRDLLLNPPAYDIASTIQEICKLMSNVTCSIPEFTCVSSAKLVKLIELREANHIEFGRIKNVAEEILQLHNNSELCEILKLLMDPTWVATGLKLDFDTLVNECEWVSHRIGELISVDGEVDQEISSLPLIPSDFFEDIESVWKGRVKRKYMEDLFEEVEEAAKSLQLAVSEDFLPVISRIRATTAPFGGPKGEILYAREHEAVWFKGKRFAPSVWAGTPGEVQIKELKHALDSKGRKVGEEWYTTAKVEDALMRYHEANEKARVKVLELLRGLSAQLQSKINALVFASMLLIIAKALFAHVSEGRRRKWVFPTLVEFSSSENGKHYDEVINMEIRGLSPYWFDVSQGDAVCNTIRMESLFLLTGPNGGGKSSLLRSVCAAALLGICGFMVPAESALIPHFDAIILHMKSYDSPVDGKSSFQIEMSEIRSLLSATTSRSLVLIDEICRGTETAKGTCIAGSIVETLDAVGCLGIVSTHLHGIFDLPLRTKKTVYKAMSTEFVDGQTVPTWKLIDGICRESLAFETAKREGLSETVVQRAEELYSSVYANEKGLQDKKPRDSISEVNVNDSSEAQGKTRTTCSNINLVAQIEILKEEVESAVTALCQKKMIELYKLANSSQIPVIKCICIAAREQPPPSTIGASSVYVILRPDKKLYVGETDDLQGRVHAHRSKEGMQNAVFLSFTVQGKSVACQLETLLINQLPKQGFHLTNIADGKHRNFGTSDAILVSVTAL*

Click here to download the sequence:
Link to NCBI Protein BLAST