Transcript Information: S_Transcript_121743.p1


Annotated TAIR IDAT4G34530.1
Annotated Gene Namecryptochrome-interacting basic-helix-loop-helix 1
Annotated Gene Symbol(s)CIB1
Annotation TypeOrtholog
Chromosome Positionchr4:16498466-16499946 | Forward length=335
E-Value2.2E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.56383477193179
Replicate 20.56091837858089
Replicate 30
Condition 2: 8 Hour
Replicate 10.63253276364377
Replicate 21.1375516257488
Replicate 31.3548208223505
Condition 3: 24 Hour
Replicate 10
Replicate 20.19206619979955
Replicate 30.96185762561883


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_121743.p1 GENE.S_Transcript_121743~~S_Transcript_121743.p1 ORF type:3prime_partial len:236 (+),score=54.98,HLH|PF00010.22|1.7e-08 S_Transcript_121743:581-1285(+)
ATGTCTGCAGCTTCTCATTTGTACCAGCAAGTGCAAGCAACTCCAATTGCATGCCTGTTTGAGGAATATGAACAGCTTCAGCATCAGGGGATTCCCCTTCCCCACCTTATTCCTCTTCATCAAACTCCTACTAGTAATCAGTATCAGCATCAGTCCTGCAATGAATTATGTAATAACTTCACTGCAGACAATCCAGATTATTCTTCGTGGATTTCTACTACTATTGTTAATCTTGAGACTAGTAATAGCTCTCATGATCATGACCAGCAACAAAATCAAGCTGCAGCTAGTAATCATGAAAGGAAGATCAGAAAAAGCGTCTATCTTAAGACCAAGGAGAGGAGACAAAGAAAATGGAGGAATAAAGGCAGCATGATGGAAGATGATCAAGTTGAGGAGAACAAGATTAGTATTGGAGATATCAGTAATGAAAAAGGCGAGAAAAGAGCAAATGATCAAGAGAAGTCGGCTACTTGTGTGTATGTGAGAGCCAGGAGGGGGCAAGCCACAGATAGTCACAGCCTTGCTGAAAGGGTAAGAAGAAAGAAAATCAGCGACAGGATGAAGCTGTTACAATCACTTGTTCCTGGCTGTGACAAGATAGCAGGCAAGGCCCTGATCCTGGATGAAATAATCAACTATGTCCAGTCCTTACAGAATCAAGTCGAGTTCCTAATGGCAAAGCTAGCTTCTCTTGACCCCACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_121743.p1 GENE.S_Transcript_121743~~S_Transcript_121743.p1 ORF type:3prime_partial len:236 (+),score=54.98,HLH|PF00010.22|1.7e-08 S_Transcript_121743:581-1285(+)
MSAASHLYQQVQATPIACLFEEYEQLQHQGIPLPHLIPLHQTPTSNQYQHQSCNELCNNFTADNPDYSSWISTTIVNLETSNSSHDHDQQQNQAAASNHERKIRKSVYLKTKERRQRKWRNKGSMMEDDQVEENKISIGDISNEKGEKRANDQEKSATCVYVRARRGQATDSHSLAERVRRKKISDRMKLLQSLVPGCDKIAGKALILDEIINYVQSLQNQVEFLMAKLASLDPT

Click here to download the sequence:
Link to NCBI Protein BLAST