Transcript Information: S_Transcript_121844.p1


Annotated TAIR IDAT5G54850.1
Annotated Gene Nameunknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22280755-22281363 | Reverse length=202
E-Value1E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.049256535921
Replicate 219.391510104363
Replicate 321.998958736492
Condition 2: 8 Hour
Replicate 122.186056294058
Replicate 219.46250509465
Replicate 315.771815492475
Condition 3: 24 Hour
Replicate 119.297946402005
Replicate 220.427919851327
Replicate 323.073080980465


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_121844.p1 GENE.S_Transcript_121844~~S_Transcript_121844.p1 ORF type:complete len:223 (-),score=33.18 S_Transcript_121844:603-1271(-)
ATGCTGATTGTCTGGTTACACTTCGTGCAAACTAGCTTCGGAAACTATAACTCAGACGAAGAAAACAAAATGGTTCAAACACTAGAAGCAATCAGAGGTGGCGGAGGCTCCATCAGGGTGGGCACTGTTGGAACAATTGGTTCTCTGATTACTAGGGAATTAGAATCTTCGAGTTTGGCATCCTGTGCCTCTTCATCATCCTTACATGCTGTGTCTCGTAGTCATGGCCCTCTCAAGCAGCAGAAATCAATGGACGATGCAAACGGTATTGGTAAGAATATTGTTATCAAGCATGGGAGTCCTGAAGCAGTGCGCCGGACAAGTGGCCAATATCAGCACCAGATATCAGTTACTAGTGCCACAACTCCCAAGCGCCAAAGCCAAAAGACGCCACTGAAGGATGTAGGCAATAGCACAGTCAGCAGGGGAACCAACATCGGGAAAGCCTCAGAAACTCCGAGCAAAACAAGAACCAGACGAAGCTCTCATGTCCCAATTCTCCACTCCGAAAACATCAGCTTGGAGAACACTCCTGTCAGGGATAAGCCCCTGAGGAAAGGAATTACTATTGTGGATATAGTGGATGTAAACTGTGGGAACCCTGGGGGTTCATTGAGCAATAGGCTCAAGAAGCTCAATTTCTCGAGGCTGTCTCAGAGTTTCATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_121844.p1 GENE.S_Transcript_121844~~S_Transcript_121844.p1 ORF type:complete len:223 (-),score=33.18 S_Transcript_121844:603-1271(-)
MLIVWLHFVQTSFGNYNSDEENKMVQTLEAIRGGGGSIRVGTVGTIGSLITRELESSSLASCASSSSLHAVSRSHGPLKQQKSMDDANGIGKNIVIKHGSPEAVRRTSGQYQHQISVTSATTPKRQSQKTPLKDVGNSTVSRGTNIGKASETPSKTRTRRSSHVPILHSENISLENTPVRDKPLRKGITIVDIVDVNCGNPGGSLSNRLKKLNFSRLSQSFM*

Click here to download the sequence:
Link to NCBI Protein BLAST