Transcript Information: S_Transcript_121979.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value6E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.79745022497041
Replicate 31.7776131164916
Condition 2: 8 Hour
Replicate 10.7707972403783
Replicate 20.67385086264237
Replicate 30.77045232307162
Condition 3: 24 Hour
Replicate 10.92116978574795
Replicate 20.40958695619905
Replicate 31.5194002653684


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_121979.p1 GENE.S_Transcript_121979~~S_Transcript_121979.p1 ORF type:internal len:166 (+),score=25.76,zf-RVT|PF13966.2|7e+03,zf-RVT|PF13966.2|2.1e-13 S_Transcript_121979:3-497(+)
CTTTTTTATTCCGGCGGCTCTTTGTCTTGGAATCTCCACCTACGTCGGCTGATTAGGGAATGTGAGATGGAGGAGCTTGCTTCTTTGATGGGAGTTCTGGAATGGGTGGTTCTTACTGATCGGGTTGACAGTCGGAGTTGGAAAGGGGATTCTACTGGGGTGTTCTCTTGCAAGTCTTTCCTTCGCTGCCTTGGGAATACTAGTGAGACTACTTTTCGGTTAGCGGGATTGATCTGGAAGGCGATAGCACATCTTAAGGTGTGGGATTATACCTGGACCCTTGCTTTGAGTAGGATCAATACTAATGACATGTTGCAACTACGATGCCCGGGGTGGTTTCTCTCTTCTGATGTTTGTGTGATGTGCAGGGCTAATGGTGAGTCATCTTCTCATTTATTTTTGCATTGCAAGCTGGCGCGGGCTCTTTGGGGTATGCTCTTTGGTGTGAAGGGGGAGGTGGTGGTGTGTCCCATGATGTTCCTTGAATTTCTGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_121979.p1 GENE.S_Transcript_121979~~S_Transcript_121979.p1 ORF type:internal len:166 (+),score=25.76,zf-RVT|PF13966.2|7e+03,zf-RVT|PF13966.2|2.1e-13 S_Transcript_121979:3-497(+)
LFYSGGSLSWNLHLRRLIRECEMEELASLMGVLEWVVLTDRVDSRSWKGDSTGVFSCKSFLRCLGNTSETTFRLAGLIWKAIAHLKVWDYTWTLALSRINTNDMLQLRCPGWFLSSDVCVMCRANGESSSHLFLHCKLARALWGMLFGVKGEVVVCPMMFLEFLQ

Click here to download the sequence:
Link to NCBI Protein BLAST