Transcript Information: S_Transcript_121982.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value4E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23975676788451
Replicate 20.39752773977504
Replicate 30.83075387763967
Condition 2: 8 Hour
Replicate 10.38424126697537
Replicate 20.60464455783045
Replicate 30.38406932621588
Condition 3: 24 Hour
Replicate 10.78720300867006
Replicate 20.61253544800939
Replicate 31.1361281263566


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_121982.p1 GENE.S_Transcript_121982~~S_Transcript_121982.p1 ORF type:5prime_partial len:111 (+),score=9.28,zf-RVT|PF13966.2|4.6e-12 S_Transcript_121982:3-335(+)
TTTACCTGGACACTTGCTCTTAATAGGATCAACACTAATGACATGTTGCAAAAGCGACGTCTGGGGTGGTGTCTCTCTCCTGATGTTTGTGTGATGTGTGGGGAGGGTGGTGAGTCAGCTTCTCATTTATTTTTGCACTGCAAGTTGGCGCGAGCTCTTTGGGCCAAGCTCTTTGGTGTAATAGTGCGATTGCTATACAAGCGCCGCAGTCTCTGCGGCGCTGTCCAAATTACTCACCTGCGTCATTCGCCCTCTCTTCATCTCTTCCTCTCAACCCAAATTAAAAACATGCGTCCTCTTTCCTCTCTTTCTCTCAGCCCAAACAAGCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_121982.p1 GENE.S_Transcript_121982~~S_Transcript_121982.p1 ORF type:5prime_partial len:111 (+),score=9.28,zf-RVT|PF13966.2|4.6e-12 S_Transcript_121982:3-335(+)
FTWTLALNRINTNDMLQKRRLGWCLSPDVCVMCGEGGESASHLFLHCKLARALWAKLFGVIVRLLYKRRSLCGAVQITHLRHSPSLHLFLSTQIKNMRPLSSLSLSPNKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST