Transcript Information: S_Transcript_122053.p1


Annotated TAIR IDAT5G48560.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19684160-19686871 | Forward length=498
E-Value5.4E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1375327772002
Replicate 21.6256792305537
Replicate 30.42709494088338
Condition 2: 8 Hour
Replicate 13.5467491264284
Replicate 22.637523208052
Replicate 35.3850562370479
Condition 3: 24 Hour
Replicate 10.50588151241376
Replicate 20.81112588799559
Replicate 31.2212779396161


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122053.p1 GENE.S_Transcript_122053~~S_Transcript_122053.p1 ORF type:3prime_partial len:475 (+),score=112.28,HLH|PF00010.22|2.3e-06 S_Transcript_122053:327-1748(+)
ATGGATAAAGAATTCTTCATGAATGCTAGTATGCCACCTCCACTTCAATTTGATCATCCATTCTCTTCAGCAATGAACACAACATGGCAAACACTCTCAACAGCAATGGAAATCCAACCTTCTCAATGCAATGATACTTTTCTCTCTCCTCCCCCTAGTACTACTACAGCTGATCACTTTGAGTCTGCTCTAAGCTCCATGGTTTCCTCCCCTAATGCTTCCGGCTCGTCGAACGACAATTTTATGATCAGAGAGTTGATTGGTAAATTGGGCAACATTTGCAACTCCGGCGACATCCCCACCAGTGCACCACCAGGCTTACCACCATACATTGGCGGCGGTGGCGGTGGAGGTGGGAGCTGTAGCACTAACAATTCTTGCTATAGCACCCCATTGAATTCACCCCCAAAAGTTGCTGGGAGGCCAATTATGGATCCTTTAATGAAAGAAAACTTCCCCAATTTGGGGAATTCAATTCCCTTGGGCTCAAATTTGCCTGCAATGCCAGGAGATCCTGGATTCGCGGAACGAGCGGCGAGGTTCTCTTCGTTTGGTAGTAGGAGTTTCAATGGCAGGACAAGCCAATTTGTAGCTAATAATAACAACCCAGATTATCAATATAGATCAAACTCTTCTAATTTAGGTGGAAGTGGTAAATTAAATAGAGTTTCTAGTAGCCCTTCTCTAAAGGAAGCTGGACCTCAAGCTGAAAATATTAGGAATTCCTTAGGTAACTCCATCAATGAGAGGAGAAATACAGGTACTTCTGTTCCAGATCAAGGTGAATTTTGTAGTTCTCATGAAAATTCATCAGCTTCTGGTCAAAATACCCCAAACAGGAAAAGAAAAGCAGCTCCCAAAGGCAAAACAAAGGAAAATCAAGCTCCCATCAAAGAAGATGAAAATGGGGATGATTCCAGTGCAAAGAGAACAAAGTCAGAGGATGGAAGTGGTAAAGAAGATGCAAAAACAGAGGAAAACAGAGGAGATGAAAGCAAGAAACAGAGTAATTCTAATCAAAAGCCTCCTGAAGCTCCAAAAGATTATATTCATGTTAGAGCTAGGAGGGGTCAAGCCACTGATAGCCATAGTCTTGCTGAAAGAGTTAGGAGAGAAAAAATTAGTGAAAGAATGAAGCTCCTTCAGGATCTTGTACCTGGCTGCAATAAGGTGACTGGAAAAGCACTAATGCTTGATGAAATAATCAACTATGTTCAATCCTTGCAGAGACAAGTTGAGTTCCTTTCAATGAAATTAGCCTCTGTAAATCCAAGGCTAGAGCTCAACATGGACAACCTTTTCTCAAAGGATGCAATCCAACCAAATTGCTCAATGCCGCATCCAATGTACCCAGTAGATTCCTTGGCACCAACGCTTTATGGCCAGCATCATCAAAATCCTTTAACAACAACAAGCGGGCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122053.p1 GENE.S_Transcript_122053~~S_Transcript_122053.p1 ORF type:3prime_partial len:475 (+),score=112.28,HLH|PF00010.22|2.3e-06 S_Transcript_122053:327-1748(+)
MDKEFFMNASMPPPLQFDHPFSSAMNTTWQTLSTAMEIQPSQCNDTFLSPPPSTTTADHFESALSSMVSSPNASGSSNDNFMIRELIGKLGNICNSGDIPTSAPPGLPPYIGGGGGGGGSCSTNNSCYSTPLNSPPKVAGRPIMDPLMKENFPNLGNSIPLGSNLPAMPGDPGFAERAARFSSFGSRSFNGRTSQFVANNNNPDYQYRSNSSNLGGSGKLNRVSSSPSLKEAGPQAENIRNSLGNSINERRNTGTSVPDQGEFCSSHENSSASGQNTPNRKRKAAPKGKTKENQAPIKEDENGDDSSAKRTKSEDGSGKEDAKTEENRGDESKKQSNSNQKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNPRLELNMDNLFSKDAIQPNCSMPHPMYPVDSLAPTLYGQHHQNPLTTTSGP

Click here to download the sequence:
Link to NCBI Protein BLAST