Transcript Information: S_Transcript_122071.p1


Annotated TAIR IDAT4G33990.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)EMB2758
Annotation TypeHomolog
Chromosome Positionchr4:16290141-16292612 | Reverse length=823
E-Value4E-102
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0131853262124
Replicate 20.89595084497522
Replicate 30.53830321056195
Condition 2: 8 Hour
Replicate 11.1636951568994
Replicate 21.5047055557177
Replicate 31.5148318094911
Condition 3: 24 Hour
Replicate 10.63760446736506
Replicate 21.1792084703429
Replicate 30.99223778751091


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122071.p1 GENE.S_Transcript_122071~~S_Transcript_122071.p1 ORF type:5prime_partial len:788 (+),score=95.04,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|0.0044,PPR_2|PF13041.2|2.4e-07,PPR_2|PF13041.2|1.6e+02,PPR_2|PF13041.2|7.6e-06,PPR_2|PF13041.2|56,PPR_2|PF13041.2|3.9e-05,PPR_2|PF13041.2|84,PPR_2|PF13041.2|4.2e-09,PPR_2|PF13041.2|92,PPR_2|PF13041.2|8.9e+03,PPR|PF01535.16|6.3e+03,PPR|PF01535.16|0.35,PPR|PF01535.16|0.43,PPR|PF01535.16|4.6e-05,PPR|PF01535.16|10,PPR|PF01535.16|2.2,PPR|PF01535.16|0.47,PPR|PF01535.16|0.0094,PPR|PF01535.16|1.9,PPR|PF01535.16|0.00044,PPR|PF01535.16|0.96,PPR|PF01535.16|0.49,PPR_3|PF13812.2|7.8e+03,PPR_3|PF13812.2|4.5,PPR_3|PF13812.2|3,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|58,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|0.54,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|5.8e+02,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|2.6,PPR_3|PF13812.2|16,PPR_1|PF12854.3|36,PPR_1|PF12854.3|0.017,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|0.87,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.21 S_Transcript_122071:2-2365(+)
TATCACTGTATTATTTTTCACTTCCATTCTGAGAGCAGACGAGTAGTAATTTACAGGTTCCATCCTTTTTCCCCATTCCATGATAGTCCCTCAAAAAAAATCTTGAAAGCTCTTGGTAATCCAACATCTTTCTTCAACTACCAGACTACCCCAAGTTTCATTATTTTTCCCTTTTTCAACATATTCACTCCTCTCAATGGCTTCCTTAGATTTTTTATTCCACCATCCATCTTCAGATTTTCACCTCTTCTTCACTCCAATCACTTAAATCCTTCACCTTTCTCTACCCTTTCTTCTTCTTGCTTAGAATTTTGCCAAGACCTTCAATCCCTCAAAGCTATTCATGCCCATCTCATTGTCTCTTCTCAGTACCACTTCCCTCCAATTAGCTCAAAGCTTATCACTTTGTATGCCAATTTTGGTGATTTAAGGACCCCTTTGTCAATTGTGAGCTCCTTACATGAATCCAACTCTAAAGTTTGGAACTATATGTTGAAATCATCTCTTGACCTTGGCTTTTTTGAGATGGGTATTGAAGTTTATAAGCAAATGAGGCAGTTAGGTGATGTCGAGCATGATGGTTTCACTTTATCAATTGTTAATCAATTATATATGATGTTATGTTGTGATGTTAGATATGCTAAGATGATTCATTGTGTTGGGATTCAAATGGGTTATACTAAAGATGTGTACTTTTGCAATACCCTGATTAATTTTTACTTGAAATGTTGTTATGCAAGTTTAGCCAACCAGGTGTTCGATGAAATGTCTCATAGAGATGTTGTATCTTGGACTTCAATGATTTCATGTTATGTTAGTGAAGGAAACATATCCCTTGCTTTTGAGTCGCTCAGTGAAATGAGAAATGAGGTAGAACCCAATTTTGTGACTGTAATCACATTATTGCAGACATGTTCAACTAGTGGGGATGTGATTTTAGGCAACCAATTTCATGGCTATCTAATAAAGAAAGGGTTTCTAAATGATTGGTCTGTGAGAAATTCACTATTGCAGATGTATGCTAACAAGGGTACCCCTAAAGATGTGGAAATGGTCTTTTCTGAATTGGGTACAATTGATGTTGTCGCTTGGAATATTTTGATTTCATTTTACCTCTCAGTTGGAAATATTATAAGAGTGATTGAAAATTTCCATGATATGCCTAGAGAACAAGGGATTACACCTAGTGTGGAGACATTAACCTTAATCGCATCGTCGTTATCCAAATGTGGAAGCTGTGCTCAAGGTCAACAGCTGCATTGCTTTGCCATGAAGACTGGTTTGTCTGACCAGGTCTTTCTGACTTGTTTGATGGATCTCTATAGTAAGTTTGGTGATTTGGAAGCTTCCCTTAGATTGTTCACGGAAATCCCTTGTGAGAGTAACACCATTACGGTGAGCACTCTGATGTCTGGTTTTATCGAACATGGGGAATATGAAAAGGCCATTGGTTTGTTCAAGCGACGACAATCTGCTAGAGTTGAACCCACTGTCGATATAATAAAAGCTCTTCTTGATGTATGTGGTGACACTGGAGCTTTACATATGGGTAAAGAAATTCATGGTTACTACATGAAGGATTCATTCCGTGATTCATCAGAAAGCAATTCGGTGTTGGAGACCTCTATTTTGAACATGTACATAAGATGTGGAAGCCTTTTGTATGCAAGGCATTGTTTCAGAATGATGGTTGAGAAAGATGTTGTAGCATGGACGTCTATGATCGAGGGCTTGGGAACCTATGGGCTCGGCCTTGAAGCCTTGGCACATTTCGATCAAATGCTGAAAGAGGGTATCAAACCAACTACCATTACATTCTTAAGCATACTATCTGCCTGTAGCCACTCAGGCCTAACAAACGAAGGATGTGATCTCTTGTATGCAATGAAATGGGAATTTGGTGTCGAGCCTGAACTGAATCATTACACATGCATCGTTGATCTTTTGGGGCGATCAGGAAAGCTCAAAGAGGCTCTTACTGTAATTCTGAAACTGGTGGCTTGTCCTGATAGTAGGATATGGGGTGCACTGCTTTCAGCCTCTAGAGTATATATGGACAAAAAAATTGGCAATTATGCTGCCAAATGCCTCTTAGAGTTAGAACCAGATAATATTGGATACCAAATCATCTTCAGTAATATGCAAGCTAGTGCAGAACAGTGGAATCAAGTGGAAGAACTGAGAAACATAGTAACTGAGGTGAATCCAAAGAAGACGCCTGGATGGAGTTGCATTGAAACAAACGGGGAAATTCAGGGTTTTATATCCGGAGATAGATCACATCCTGATGTAGAGGTTGTTTACGAGTTATTAGGGCTCTTGAGCAGGCAAATGAAGGATCCTGATTTGTGTTTGTTAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122071.p1 GENE.S_Transcript_122071~~S_Transcript_122071.p1 ORF type:5prime_partial len:788 (+),score=95.04,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|0.0044,PPR_2|PF13041.2|2.4e-07,PPR_2|PF13041.2|1.6e+02,PPR_2|PF13041.2|7.6e-06,PPR_2|PF13041.2|56,PPR_2|PF13041.2|3.9e-05,PPR_2|PF13041.2|84,PPR_2|PF13041.2|4.2e-09,PPR_2|PF13041.2|92,PPR_2|PF13041.2|8.9e+03,PPR|PF01535.16|6.3e+03,PPR|PF01535.16|0.35,PPR|PF01535.16|0.43,PPR|PF01535.16|4.6e-05,PPR|PF01535.16|10,PPR|PF01535.16|2.2,PPR|PF01535.16|0.47,PPR|PF01535.16|0.0094,PPR|PF01535.16|1.9,PPR|PF01535.16|0.00044,PPR|PF01535.16|0.96,PPR|PF01535.16|0.49,PPR_3|PF13812.2|7.8e+03,PPR_3|PF13812.2|4.5,PPR_3|PF13812.2|3,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|58,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|0.54,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|5.8e+02,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|2.6,PPR_3|PF13812.2|16,PPR_1|PF12854.3|36,PPR_1|PF12854.3|0.017,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|0.87,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.21 S_Transcript_122071:2-2365(+)
YHCIIFHFHSESRRVVIYRFHPFSPFHDSPSKKILKALGNPTSFFNYQTTPSFIIFPFFNIFTPLNGFLRFFIPPSIFRFSPLLHSNHLNPSPFSTLSSSCLEFCQDLQSLKAIHAHLIVSSQYHFPPISSKLITLYANFGDLRTPLSIVSSLHESNSKVWNYMLKSSLDLGFFEMGIEVYKQMRQLGDVEHDGFTLSIVNQLYMMLCCDVRYAKMIHCVGIQMGYTKDVYFCNTLINFYLKCCYASLANQVFDEMSHRDVVSWTSMISCYVSEGNISLAFESLSEMRNEVEPNFVTVITLLQTCSTSGDVILGNQFHGYLIKKGFLNDWSVRNSLLQMYANKGTPKDVEMVFSELGTIDVVAWNILISFYLSVGNIIRVIENFHDMPREQGITPSVETLTLIASSLSKCGSCAQGQQLHCFAMKTGLSDQVFLTCLMDLYSKFGDLEASLRLFTEIPCESNTITVSTLMSGFIEHGEYEKAIGLFKRRQSARVEPTVDIIKALLDVCGDTGALHMGKEIHGYYMKDSFRDSSESNSVLETSILNMYIRCGSLLYARHCFRMMVEKDVVAWTSMIEGLGTYGLGLEALAHFDQMLKEGIKPTTITFLSILSACSHSGLTNEGCDLLYAMKWEFGVEPELNHYTCIVDLLGRSGKLKEALTVILKLVACPDSRIWGALLSASRVYMDKKIGNYAAKCLLELEPDNIGYQIIFSNMQASAEQWNQVEELRNIVTEVNPKKTPGWSCIETNGEIQGFISGDRSHPDVEVVYELLGLLSRQMKDPDLCLLS*

Click here to download the sequence:
Link to NCBI Protein BLAST