Transcript Information: S_Transcript_122158.p1


Annotated TAIR IDAT5G49430.1
Annotated Gene NameWD40/YVTN repeat-like-containing domain;Bromodomain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20037338-20045454 | Reverse length=1677
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0818796328485
Replicate 27.5390436678945
Replicate 38.2791512067085
Condition 2: 8 Hour
Replicate 19.2874396691032
Replicate 27.4198090965927
Replicate 37.1052825349938
Condition 3: 24 Hour
Replicate 17.6109476818151
Replicate 26.8712728564805
Replicate 36.6751809313373


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122158.p1 GENE.S_Transcript_122158~~S_Transcript_122158.p1 ORF type:3prime_partial len:597 (+),score=119.42,WD40|PF00400.28|1.1e-06,WD40|PF00400.28|6.9e-06,WD40|PF00400.28|7.8e-07,WD40|PF00400.28|0.36,WD40|PF00400.28|5.8,WD40|PF00400.28|1.1e+02,WD40|PF00400.28|4.3e+02 S_Transcript_122158:793-2580(+)
ATGCTCAAAAAAGGGGTTATGGCTCTTGAAAAGGAGGCTCCTTCGAGTCATCGGACTGTTAATGTGAAGCCATTGACTTTCCCCTGTAAGGTTATGGGGAAAGCTGAATTTGCCGATCCTGCAATGAATCCTGATGTTGAGGGCCTTGAGGCTGATGTGGATGTTGATTATAGAGAGCTTTATTTTCTAATTATGCATTTCTTGTCTGCTGGACCATGTCAAAGAACTTGTGGACAATTTTGGAATGAGCTTCTTGAACACGACCTCTTACCTAGAAGATATCATGCTTGGTATTCGAGGAGCGGTGCTCCTAGTAGTGATGAGAATGATGATGGCTTGTCTTTTCCATTGAGTTACAATAAAGTAGTGGAGAGGTATCCTCATATTCAAAAGGATCACTTAGTAAAGCTTCTGAAGCAACTCTTACTCAATAAAGTCCATCCTCAGCAAGGTGTGGTTGCTAAAAACGTTCCTAATGCAGCTGATGTTCCTACACTTTTGGGCACAGGATCCTTTTCACTTTTGGGCTATGATGAAAATAAAGGATTCAATGAGGACAAACCACCTGAATTTATGCGTTGGCCTCATATGCATGCTGATCAGGTACGTGGGCTAAGGTTGAGGGAAATTGGTGGTGGATTTGCTAGACATCATCGAGCACCATCTACTCGTGCAGCCTGTTATGCCATTGTAAAGCCATCAACTATGGTGCAAAAGATGCAGAACATTAAGAAGGTCAGGGGACACCGCAATTCTGTTTATTGTGCTACGCTTGATCGGTCAGGAAGATTTGTCATTACTGGCTCAGATGACCGCCTTGTAAAAATTTGGTCCATGGAAACTGCCTTTTGCTTGGCCAGCTGCCGGGGACATGAAGGTGACATCACTGACTTGGCTGTGAGTTCCAACAATGCGTTAGTGGCATCTTCGTCAAATGATTGTATCATTAGAGTTTGGCGGTTGCCAGATGGCCAGCCAATTTCAGTTTTGCGTGGGCATACAGGAGCAGTCACGGCCATCGCATTTAGTCCTAGACCTAGTGCCATATATCAGCTTCTGTCCTCATCAGATGATGGAACTTGTAGATTATGGGATGCAAGGTACTCCCAGTTCAAGCCACGGATTTATGTACCCAGGCCACCGGATTCTATAGCAGGAAAGAGCACCGCTCCTCCCAGTGCTGGTCAACAGAATCATCAGATATTTTGTTGTGCATTCAATGCTAGTGGAACTGTCTTTGTCACTGGCAGCTCAGATAATCTTGCCAGAGTATGGAATGCTTGTAAATCTGGCACAGATGATTCAGAACAACCTATCCATGAGATGGATGTTTTATCTGGCCATGAGAATGATGTTAATTATGTACAGTTCAGTGGTTGTGCTGTGACTTCTAGATTTTCTGCTGCTGATACAACAAAGGAGGAAAACTTCCCAAAATTCAAAAATTCATGGTTTGCTCATGATAACATAGTCACATGCTCTCGTGATGGAAGTGCAATCATCTGGATTCCACGGTCACGTAAATCACATGGGAAAGCTGGGCGTTGGACACGGGCATATCATCTCAAGGTTCCTCCTCCGCCAATGCCACCTCAGCCTCCTCGAGGGGGCCCGCGACAGAGAGTTCTTCCAACACCTCGTGGCGTTAATATGATTGTGTGGAGCCTAGATAACCGATTTGTCCTTGCTACCATCATGGATTGCAGAATATGTGTATGGAATGCTGCTGATGGTAGCTTGGTTCATTCTTTGACCGGTCATACTGAGTCTACATATGTGCTGGATGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122158.p1 GENE.S_Transcript_122158~~S_Transcript_122158.p1 ORF type:3prime_partial len:597 (+),score=119.42,WD40|PF00400.28|1.1e-06,WD40|PF00400.28|6.9e-06,WD40|PF00400.28|7.8e-07,WD40|PF00400.28|0.36,WD40|PF00400.28|5.8,WD40|PF00400.28|1.1e+02,WD40|PF00400.28|4.3e+02 S_Transcript_122158:793-2580(+)
MLKKGVMALEKEAPSSHRTVNVKPLTFPCKVMGKAEFADPAMNPDVEGLEADVDVDYRELYFLIMHFLSAGPCQRTCGQFWNELLEHDLLPRRYHAWYSRSGAPSSDENDDGLSFPLSYNKVVERYPHIQKDHLVKLLKQLLLNKVHPQQGVVAKNVPNAADVPTLLGTGSFSLLGYDENKGFNEDKPPEFMRWPHMHADQVRGLRLREIGGGFARHHRAPSTRAACYAIVKPSTMVQKMQNIKKVRGHRNSVYCATLDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNALVASSSNDCIIRVWRLPDGQPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRLWDARYSQFKPRIYVPRPPDSIAGKSTAPPSAGQQNHQIFCCAFNASGTVFVTGSSDNLARVWNACKSGTDDSEQPIHEMDVLSGHENDVNYVQFSGCAVTSRFSAADTTKEENFPKFKNSWFAHDNIVTCSRDGSAIIWIPRSRKSHGKAGRWTRAYHLKVPPPPMPPQPPRGGPRQRVLPTPRGVNMIVWSLDNRFVLATIMDCRICVWNAADGSLVHSLTGHTESTYVLDV

Click here to download the sequence:
Link to NCBI Protein BLAST