Transcript Information: S_Transcript_12218.p1


Annotated TAIR IDAT1G11910.1
Annotated Gene Nameaspartic proteinase A1
Annotated Gene Symbol(s)APA1, ATAPA1
Annotation TypeOrtholog
Chromosome Positionchr1:4017119-4019874 | Reverse length=506
E-Value7.6E-231
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4617026142542
Replicate 21.6547092168136
Replicate 31.9364872887781
Condition 2: 8 Hour
Replicate 12.3991064106775
Replicate 22.6286922151679
Replicate 32.9842186646974
Condition 3: 24 Hour
Replicate 12.0752639316064
Replicate 22.4930192733982
Replicate 32.1438737744349


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12218.p1 GENE.S_Transcript_12218~~S_Transcript_12218.p1 ORF type:internal len:400 (+),score=94.92,Asp|PF00026.19|1.1e-109,SapB_2|PF03489.13|5.6e-15,SapB_1|PF05184.11|5.5e+03,SapB_1|PF05184.11|1.1e-14,TAXi_N|PF14543.2|1e-05,TAXi_N|PF14543.2|8.4e+03 S_Transcript_12218:3-1199(+)
TATCTTTCCGGAAACCTTGAGGAGCTTGGCGACACTGATATTGTTGCCCTGAAGAACTACATGGATGCTCAGTACTTTGGTGAGATTGGGATCGGTTCCCCGCCTCAGAAGTTCACTGTTATTTTTGACACAGGTAGCTCTAACCTGTGGGTGCCATCTTCAAAGTGCTACTTCTCGATTGCTTGCTTTTTCCACTCCAAGTACAAGTCCAGCTCCTCTAGTACCTATAAGAAGAATGGAACTTCTGCTGCTATTCGTTATGGTACTGGAGCTATATCAGGTTTCTTCAGTGAAGATAATGTGCAAGTTGGTGAACTCGTCGTTAAAAATCAGCAATTCATCGAGGCAACTAGAGAACCTGGTATCACATTCATGGTTGCCAAGTTTGATGGCATACTTGGACTGGGGTTCAAAGAGATAGCTGTCGGGGGTTCTGTCCCTGTGTGGTACAATATGATGGAGCAAGGGCTGGTCAAAGAGCCAATATTTTCGTTCTGGCTCAATCGTAATCCAGATGATGAAGAGGGTGGTGAGCTTGTATTTGGTGGGGTTGATCAAAAACACTATCGAGGCGAGCACACATATGTTCCCGTTACAAGAAAGGGTTATTGGCAGTTTGATATGGGTGATGTTCTCATTAACGGGAAAACAACAGGGTATTGTGCTGGTGGATGTGCAGCTATTGCTGATTCTGGAACTTCTTTGCTGGCTGGTCCTACGACCGTTATCGCCCAAATAAATCAAGCAATTGGTGCAACTGGTGTTGCCAGTCAGGAGTGCAAGGCTGTAGTTGATCAGTACGGGCAGACAATCATTGATATGCTGATTTCAGAGGAATCTCCAAAGAAGGTCTGCTCACAAATTGGTGTCTGCTCCTTTGATGGCACCCGTGGTGTTAGCATGGGGATTGAGACTGTGGTGGAAAAGGAAAGTTCTGGATTATCATCTGTTGGTTTGCATGATGGTAAGTGCTCAGCTTGTGAGATGGCTGTTGTGTGGATCGAGAATCAGCTCAAGCAAAATGTGACCCAGGACCGTGTAATAAACTATGTGAATGAGCTATGCGATCGCCTTCCCAGTCCAAACGGACAATCAGCTGTCAACTGTAACCATGTTTCTTCCATGCCTCCTGTTTCCTTTACTATTGCGAACAAAGTGTTTGAACTTACTGCTGAGGAGTATATCCTCAAGGTTGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12218.p1 GENE.S_Transcript_12218~~S_Transcript_12218.p1 ORF type:internal len:400 (+),score=94.92,Asp|PF00026.19|1.1e-109,SapB_2|PF03489.13|5.6e-15,SapB_1|PF05184.11|5.5e+03,SapB_1|PF05184.11|1.1e-14,TAXi_N|PF14543.2|1e-05,TAXi_N|PF14543.2|8.4e+03 S_Transcript_12218:3-1199(+)
YLSGNLEELGDTDIVALKNYMDAQYFGEIGIGSPPQKFTVIFDTGSSNLWVPSSKCYFSIACFFHSKYKSSSSSTYKKNGTSAAIRYGTGAISGFFSEDNVQVGELVVKNQQFIEATREPGITFMVAKFDGILGLGFKEIAVGGSVPVWYNMMEQGLVKEPIFSFWLNRNPDDEEGGELVFGGVDQKHYRGEHTYVPVTRKGYWQFDMGDVLINGKTTGYCAGGCAAIADSGTSLLAGPTTVIAQINQAIGATGVASQECKAVVDQYGQTIIDMLISEESPKKVCSQIGVCSFDGTRGVSMGIETVVEKESSGLSSVGLHDGKCSACEMAVVWIENQLKQNVTQDRVINYVNELCDRLPSPNGQSAVNCNHVSSMPPVSFTIANKVFELTAEEYILKVG

Click here to download the sequence:
Link to NCBI Protein BLAST