Transcript Information: S_Transcript_122246.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value7E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.23533642194682
Replicate 30
Condition 2: 8 Hour
Replicate 10.34120624507413
Replicate 20.95453220862833
Replicate 30.1136845205599
Condition 3: 24 Hour
Replicate 10.17475906792475
Replicate 20.36262098522156
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122246.p1 GENE.S_Transcript_122246~~S_Transcript_122246.p1 ORF type:complete len:375 (+),score=72.57,PPR_2|PF13041.2|4.7e-14,PPR_2|PF13041.2|7.1e-08,PPR_2|PF13041.2|1.6e-11,PPR_2|PF13041.2|6.6e-17,PPR_2|PF13041.2|1.5e-18,PPR_2|PF13041.2|8.1e-20,PPR_2|PF13041.2|1.5e-16,PPR_2|PF13041.2|1.2e-14,PPR_2|PF13041.2|2.1e-17,PPR_2|PF13041.2|3e-05,PPR_1|PF12854.3|4.6e-05,PPR_1|PF12854.3|2.9e-06,PPR_1|PF12854.3|4.5e-08,PPR_1|PF12854.3|1.8e-10,PPR_1|PF12854.3|4.7e-10,PPR_1|PF12854.3|7.2e-14,PPR_1|PF12854.3|9.4e-13,PPR_1|PF12854.3|2.3e-09,PPR_1|PF12854.3|1.2e-12,PPR_1|PF12854.3|0.0004,PPR|PF01535.16|5.7e-06,PPR|PF01535.16|0.00099,PPR|PF01535.16|5.9e-06,PPR|PF01535.16|5.8e-08,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|7.5e-07,PPR|PF01535.16|3.3e-05,PPR|PF01535.16|3e-11,PPR|PF01535.16|0.0022,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.00029,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|0.00029,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|6.7e-06,PPR_3|PF13812.2|0.00052,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|0.00013,PPR_3|PF13812.2|0.43,MRP-S27|PF10037.5|0.001,MRP-S27|PF10037.5|0.52,MRP-S27|PF10037.5|0.64,MRP-S27|PF10037.5|1.8,MRP-S27|PF10037.5|12,DUF3368|PF11848.4|3.2e+02,DUF3368|PF11848.4|4.3e+02,DUF3368|PF11848.4|4.1e+02,DUF3368|PF11848.4|2e+02,DUF3368|PF11848.4|0.0018,ATP13|PF12921.3|90,ATP13|PF12921.3|3.4e+02,ATP13|PF12921.3|94,ATP13|PF12921.3|76,ATP13|PF12921.3|0.19 S_Transcript_122246:62-1126(+)
ATGAAGGGCAAGGGCATTTCACCTAATGTCCACACTTACACCTCTTTGGTTCGAGGATTCTTTAATTTGGGCCTCAGAGAAGAAGCTATGGCCTTGTTGGCTGACATGTTGGAGAGTAGCATTTCACCAGATGTTCAGACCTTCAGCATGCTTGTAGACATGTGTTGCAAAGATGGCAGGGTGGAAGAAGCAAAGTCCGTAATCGACTTCATGATTGAGAGAGGTGAGGCTCCAAACATCATTACCTACAGTTCTCTCTTGGATGGATACTGTTTACGTGGCCAAATGGATGAGGCATCCAAGTTACTTGATTTCATGCTCAAACGTGGTTTCCATCCTAATGTTGTGACCTTTTCCACTTTGATAAACGGATTTATCAAGGCTAAAAACATTGACAAAGGTTTCAAAGTTTTTCAGGAAATGTCTTGTCATGGGATTGTACCTAATGTTGCTACCTACACCACTCTTATTGATGGCTTGTGTAAAGCTAGAAAGCTGCAAGCTGCCCGTCAGATGTTTGACGAAATGCAGGTCAATGGAGTTGCTCCTAATGTAGTGACTTATGCATCATTGCTTGATGGCTTATGCAAAAACGCACAGTTTGATGAGGCAATGGAATTCTTGAGGGAGATGAATGGCAAGGGAGTGCACCCTAATCTCACCATCTACAATATATTAATTGATGGTCTTTGTGAGGCTGGGTTTCTTAAAGATGCATCAAATGTCTTCTCCAGTCTCCTGTCTAAGGGTTTGCGGCTAGATAATCAGACGTACAACATAATGATCAAAGGATATTGTAAGAAAGGACTACTAAACGAGGCAAATGAGCTGTTCAAGAAAATGGAGGACAATGGCTGTTATCCCAATGATGCTACCTACAACACAATTATTCGGGGATACCTTTATGCTAATGATATCAGGAAGACCTTGGAGTTTGTGAGCAGTATGAGGAGCAAAGGATATGCCGCAGATAACCACACTATCTCCTTATTTGCAGACTTACTGTCTACTAATGACATTAGTGACGCCAACAGGGAATTGCTTCGAACTTTTTTTGCAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122246.p1 GENE.S_Transcript_122246~~S_Transcript_122246.p1 ORF type:complete len:375 (+),score=72.57,PPR_2|PF13041.2|4.7e-14,PPR_2|PF13041.2|7.1e-08,PPR_2|PF13041.2|1.6e-11,PPR_2|PF13041.2|6.6e-17,PPR_2|PF13041.2|1.5e-18,PPR_2|PF13041.2|8.1e-20,PPR_2|PF13041.2|1.5e-16,PPR_2|PF13041.2|1.2e-14,PPR_2|PF13041.2|2.1e-17,PPR_2|PF13041.2|3e-05,PPR_1|PF12854.3|4.6e-05,PPR_1|PF12854.3|2.9e-06,PPR_1|PF12854.3|4.5e-08,PPR_1|PF12854.3|1.8e-10,PPR_1|PF12854.3|4.7e-10,PPR_1|PF12854.3|7.2e-14,PPR_1|PF12854.3|9.4e-13,PPR_1|PF12854.3|2.3e-09,PPR_1|PF12854.3|1.2e-12,PPR_1|PF12854.3|0.0004,PPR|PF01535.16|5.7e-06,PPR|PF01535.16|0.00099,PPR|PF01535.16|5.9e-06,PPR|PF01535.16|5.8e-08,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|7.5e-07,PPR|PF01535.16|3.3e-05,PPR|PF01535.16|3e-11,PPR|PF01535.16|0.0022,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.00029,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|0.00029,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|6.7e-06,PPR_3|PF13812.2|0.00052,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|0.00013,PPR_3|PF13812.2|0.43,MRP-S27|PF10037.5|0.001,MRP-S27|PF10037.5|0.52,MRP-S27|PF10037.5|0.64,MRP-S27|PF10037.5|1.8,MRP-S27|PF10037.5|12,DUF3368|PF11848.4|3.2e+02,DUF3368|PF11848.4|4.3e+02,DUF3368|PF11848.4|4.1e+02,DUF3368|PF11848.4|2e+02,DUF3368|PF11848.4|0.0018,ATP13|PF12921.3|90,ATP13|PF12921.3|3.4e+02,ATP13|PF12921.3|94,ATP13|PF12921.3|76,ATP13|PF12921.3|0.19 S_Transcript_122246:62-1126(+)
MKGKGISPNVHTYTSLVRGFFNLGLREEAMALLADMLESSISPDVQTFSMLVDMCCKDGRVEEAKSVIDFMIERGEAPNIITYSSLLDGYCLRGQMDEASKLLDFMLKRGFHPNVVTFSTLINGFIKAKNIDKGFKVFQEMSCHGIVPNVATYTTLIDGLCKARKLQAARQMFDEMQVNGVAPNVVTYASLLDGLCKNAQFDEAMEFLREMNGKGVHPNLTIYNILIDGLCEAGFLKDASNVFSSLLSKGLRLDNQTYNIMIKGYCKKGLLNEANELFKKMEDNGCYPNDATYNTIIRGYLYANDIRKTLEFVSSMRSKGYAADNHTISLFADLLSTNDISDANRELLRTFFAV*

Click here to download the sequence:
Link to NCBI Protein BLAST