Transcript Information: S_Transcript_122247.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value5E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.144201238938
Replicate 30.12054075871634
Condition 2: 8 Hour
Replicate 10.27876327211939
Replicate 20.43866369881817
Replicate 30.41795779617611
Condition 3: 24 Hour
Replicate 10.42833104883518
Replicate 20.44438846228132
Replicate 30.49454989029639


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122247.p1 GENE.S_Transcript_122247~~S_Transcript_122247.p1 ORF type:3prime_partial len:306 (+),score=67.31,PPR_2|PF13041.2|1.4e-14,PPR_2|PF13041.2|7.6e-08,PPR_2|PF13041.2|7.9e-16,PPR_2|PF13041.2|1.2e-18,PPR_2|PF13041.2|1.1e-18,PPR_2|PF13041.2|8.4e-20,PPR_2|PF13041.2|1.6e-16,PPR_2|PF13041.2|9.3e-15,PPR_1|PF12854.3|7.1e-10,PPR_1|PF12854.3|1.1e-05,PPR_1|PF12854.3|1.2e-08,PPR_1|PF12854.3|3.5e-11,PPR_1|PF12854.3|3.6e-10,PPR_1|PF12854.3|5.4e-14,PPR_1|PF12854.3|7.1e-13,PPR_1|PF12854.3|1.7e-09,PPR_1|PF12854.3|5.4e-06,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|0.00045,PPR|PF01535.16|8.6e-07,PPR|PF01535.16|1.2e-08,PPR|PF01535.16|8.5e-07,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|5.6e-07,PPR|PF01535.16|2.5e-05,PPR|PF01535.16|0.0058,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.00028,PPR_3|PF13812.2|0.0037,PPR_3|PF13812.2|2.9e-05,PPR_3|PF13812.2|0.019,PPR_3|PF13812.2|5e-06,PPR_3|PF13812.2|0.00039,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|14,MRP-S27|PF10037.5|4.5e+02,MRP-S27|PF10037.5|0.00013,MRP-S27|PF10037.5|0.34,MRP-S27|PF10037.5|0.6,MRP-S27|PF10037.5|1.2 S_Transcript_122247:72-986(+)
ATGGACAATTCTGCCCTTTGTAAGCCCGACCTTGTCATTTACAGCACTATTATTGACAGTTTTTGTAAAGACAGGCTGTTGAATGAGGCCTTAAAGCTCTCCTCCGAGATGAAGGGCAAGGGCATTTCACGTGATGTCTACACTTACACCTCTTTGGTTCGAGGATTCTTTAATTTGGGCCTCAGAGAAGAAGCTATGGCCTTGTTGGCTGACATGTTGGAGAGTAGCATTTCACCAGATGTTCAGACCTTCAACATGCTAGTGGACATGTGCTGCAAAGATGGCAGGGTGGAGGAAGCAAAATCCATAATCGACTTCATGATTGAGAGAGGTGAGGCTCCAAACATCATTACTTACAATGCTCTCTTGGATGGATATTGTTTACGAGGCCAAATGGACGAGGCATCCAAGTTACTTGATTTCATGCTCAAACGTGGTTTCCATCCTAATGTTGTGACCTTTTCCACTTTGATAAACGGATTTATCAAGGCTAAAAACATTGACAAAGGTTTCAAAGTTTTTCAGGAAATGTCTTGTCATGGGATTGTACCTAATGTTGCTACCTACACCACTCTTATTGATGGCTTGTGTAAAGCTAGAAAGCTGCAAGCTGCTCGTCAGATGTTTGATGAAATGCAGGTTAATGGAGTTGCTCCAGATGTAGTGACTTATGCATCATTGCTTGATGGCTTATGCAAAAACGCACAGTTTGATGAGGCAATGGAATTCTTGAGGGAGATGAATGGCAAGGGAGTGCACCCTAATCTCACCATCTACAATATATTAATTGATGGTCTTTGTGAGGCTGGGTTTCTTAAAGATGCATCAAATGTCTTCTCCAGTCTCCTGTCTAAGGGTTTGCGGCTAGATAATCAGACGTACAACATAATGATCAAAGGATATTGTAAGAAAGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122247.p1 GENE.S_Transcript_122247~~S_Transcript_122247.p1 ORF type:3prime_partial len:306 (+),score=67.31,PPR_2|PF13041.2|1.4e-14,PPR_2|PF13041.2|7.6e-08,PPR_2|PF13041.2|7.9e-16,PPR_2|PF13041.2|1.2e-18,PPR_2|PF13041.2|1.1e-18,PPR_2|PF13041.2|8.4e-20,PPR_2|PF13041.2|1.6e-16,PPR_2|PF13041.2|9.3e-15,PPR_1|PF12854.3|7.1e-10,PPR_1|PF12854.3|1.1e-05,PPR_1|PF12854.3|1.2e-08,PPR_1|PF12854.3|3.5e-11,PPR_1|PF12854.3|3.6e-10,PPR_1|PF12854.3|5.4e-14,PPR_1|PF12854.3|7.1e-13,PPR_1|PF12854.3|1.7e-09,PPR_1|PF12854.3|5.4e-06,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|0.00045,PPR|PF01535.16|8.6e-07,PPR|PF01535.16|1.2e-08,PPR|PF01535.16|8.5e-07,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|5.6e-07,PPR|PF01535.16|2.5e-05,PPR|PF01535.16|0.0058,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.00028,PPR_3|PF13812.2|0.0037,PPR_3|PF13812.2|2.9e-05,PPR_3|PF13812.2|0.019,PPR_3|PF13812.2|5e-06,PPR_3|PF13812.2|0.00039,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|14,MRP-S27|PF10037.5|4.5e+02,MRP-S27|PF10037.5|0.00013,MRP-S27|PF10037.5|0.34,MRP-S27|PF10037.5|0.6,MRP-S27|PF10037.5|1.2 S_Transcript_122247:72-986(+)
MDNSALCKPDLVIYSTIIDSFCKDRLLNEALKLSSEMKGKGISRDVYTYTSLVRGFFNLGLREEAMALLADMLESSISPDVQTFNMLVDMCCKDGRVEEAKSIIDFMIERGEAPNIITYNALLDGYCLRGQMDEASKLLDFMLKRGFHPNVVTFSTLINGFIKAKNIDKGFKVFQEMSCHGIVPNVATYTTLIDGLCKARKLQAARQMFDEMQVNGVAPDVVTYASLLDGLCKNAQFDEAMEFLREMNGKGVHPNLTIYNILIDGLCEAGFLKDASNVFSSLLSKGLRLDNQTYNIMIKGYCKKG

Click here to download the sequence:
Link to NCBI Protein BLAST