Transcript Information: S_Transcript_122249.p1


Annotated TAIR IDAT1G62670.1
Annotated Gene Namerna processing factor 2
Annotated Gene Symbol(s)RPF2
Annotation TypeHomolog
Chromosome Positionchr1:23204773-23206665 | Reverse length=630
E-Value2E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.82393192678577
Replicate 20.75136435025592
Replicate 30.39968777890156
Condition 2: 8 Hour
Replicate 10.92432032334323
Replicate 21.5237791643157
Replicate 31.1218867160516
Condition 3: 24 Hour
Replicate 10.6086809641342
Replicate 20.98233239030608
Replicate 30.54660777348549


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122249.p1 GENE.S_Transcript_122249~~S_Transcript_122249.p1 ORF type:3prime_partial len:323 (+),score=67.00,PPR_2|PF13041.2|4.6e+02,PPR_2|PF13041.2|4e-16,PPR_2|PF13041.2|4.3e-13,PPR_2|PF13041.2|1.3e-11,PPR_2|PF13041.2|2.1e-09,PPR_2|PF13041.2|8.6e-20,PPR_2|PF13041.2|1.8e-20,PPR_2|PF13041.2|1.8e-16,PPR_2|PF13041.2|1e-14,PPR_1|PF12854.3|2.4e+03,PPR_1|PF12854.3|1.9e-11,PPR_1|PF12854.3|1.3e-05,PPR_1|PF12854.3|3.7e-08,PPR_1|PF12854.3|1.1e-08,PPR_1|PF12854.3|2.5e-11,PPR_1|PF12854.3|8.4e-15,PPR_1|PF12854.3|7.7e-13,PPR_1|PF12854.3|1.9e-09,PPR_1|PF12854.3|5e-07,PPR|PF01535.16|1e+04,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|0.0025,PPR|PF01535.16|4.8e-06,PPR|PF01535.16|3.2e-06,PPR|PF01535.16|3.6e-08,PPR|PF01535.16|3.1e-09,PPR|PF01535.16|6.1e-07,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|0.001,PPR_3|PF13812.2|7.1e+02,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|0.0059,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|0.0039,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|3.6e-06,PPR_3|PF13812.2|0.00042,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|9.6,MRP-S27|PF10037.5|0.0015,MRP-S27|PF10037.5|0.24,MRP-S27|PF10037.5|0.033,MRP-S27|PF10037.5|1.5,ATP13|PF12921.3|44,ATP13|PF12921.3|98,ATP13|PF12921.3|1.5,ATP13|PF12921.3|27 S_Transcript_122249:43-966(+)
ATGGACCGTTCTGCCCTTTGTAAGCCCGACCTTGTCATTTACAGCACTATTATTGACAGTCTTTGTAAAGACAGGCTGTTGAATAAGGCTTTGAAACTCTTCTCCGAGATGAAGGACAAGGGCATTTCACCTAATGTCTGCAATTACAACTCTTTGGTTCGAGGATTCTTTAATTTGGGCCTCAGAGAAGAAGCTATGGCCTTGTTGGCTGACATGTTGGAGAGTAGCATTTCACCAGATGTTCAGACCTTCAGCATGCTAGTGGACATGTGTTGCAAAGATGGAAGGGTGGAGGAAGCAAAGTCCGTAATCGACTTCATGATTGAGAGAGGTGAGGCTCCAAACATCATTACCTACAGTTCTCTCTTGGATGGATACTGTTTACGTGGCCAAATGGATGAGGCATCCAAGTCACTTGATTTCATGCTCAAAAGTGGTTTCCATCCTGATGTTGTGACCTTGAACACCTTGATCAACGGATTTGTCAAAGCTAAAATGATTGACAAAGCCATCAAAGTTTTCAAGGAAATGTCTTGTCAAGGGATTGTGCCTGATGTTACTACGTACAATACTCTTATAGATGGCTTGTGTAAAGCTAGAAAGCTGCAAGCTGCCCGTCAGATGTTTGACGAAATGCAGGTCAATGGAGTTGCTCCTGATGTAGTGACTTACGCATCATTGCTTGATGGCCTATGCAAAAACGCACAGTTTGATGAGGCAATGGAATTCTTGAGGGAGATGAATGGCAAGGGAGTGCACCCTAATCTCACCATCTACAATATATTAATTGATGGTCTTTGTGAGGCTGGGTTTCTTAAAGATGCATCAAATGTCTTCTCCAGTCTCCTGTCTAAGGGTTTGCGGCTAGATAATCAGACGTACAACATAATGATCAAAGGATATTGTAAGAAAGGACTACTAAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122249.p1 GENE.S_Transcript_122249~~S_Transcript_122249.p1 ORF type:3prime_partial len:323 (+),score=67.00,PPR_2|PF13041.2|4.6e+02,PPR_2|PF13041.2|4e-16,PPR_2|PF13041.2|4.3e-13,PPR_2|PF13041.2|1.3e-11,PPR_2|PF13041.2|2.1e-09,PPR_2|PF13041.2|8.6e-20,PPR_2|PF13041.2|1.8e-20,PPR_2|PF13041.2|1.8e-16,PPR_2|PF13041.2|1e-14,PPR_1|PF12854.3|2.4e+03,PPR_1|PF12854.3|1.9e-11,PPR_1|PF12854.3|1.3e-05,PPR_1|PF12854.3|3.7e-08,PPR_1|PF12854.3|1.1e-08,PPR_1|PF12854.3|2.5e-11,PPR_1|PF12854.3|8.4e-15,PPR_1|PF12854.3|7.7e-13,PPR_1|PF12854.3|1.9e-09,PPR_1|PF12854.3|5e-07,PPR|PF01535.16|1e+04,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|0.0025,PPR|PF01535.16|4.8e-06,PPR|PF01535.16|3.2e-06,PPR|PF01535.16|3.6e-08,PPR|PF01535.16|3.1e-09,PPR|PF01535.16|6.1e-07,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|0.001,PPR_3|PF13812.2|7.1e+02,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|0.0059,PPR_3|PF13812.2|0.015,PPR_3|PF13812.2|0.0039,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|3.6e-06,PPR_3|PF13812.2|0.00042,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|9.6,MRP-S27|PF10037.5|0.0015,MRP-S27|PF10037.5|0.24,MRP-S27|PF10037.5|0.033,MRP-S27|PF10037.5|1.5,ATP13|PF12921.3|44,ATP13|PF12921.3|98,ATP13|PF12921.3|1.5,ATP13|PF12921.3|27 S_Transcript_122249:43-966(+)
MDRSALCKPDLVIYSTIIDSLCKDRLLNKALKLFSEMKDKGISPNVCNYNSLVRGFFNLGLREEAMALLADMLESSISPDVQTFSMLVDMCCKDGRVEEAKSVIDFMIERGEAPNIITYSSLLDGYCLRGQMDEASKSLDFMLKSGFHPDVVTLNTLINGFVKAKMIDKAIKVFKEMSCQGIVPDVTTYNTLIDGLCKARKLQAARQMFDEMQVNGVAPDVVTYASLLDGLCKNAQFDEAMEFLREMNGKGVHPNLTIYNILIDGLCEAGFLKDASNVFSSLLSKGLRLDNQTYNIMIKGYCKKGLLN

Click here to download the sequence:
Link to NCBI Protein BLAST