Transcript Information: S_Transcript_122251.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value1E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1474807119762
Replicate 22.5787676106186
Replicate 33.2933457292144
Condition 2: 8 Hour
Replicate 13.2541991717703
Replicate 23.1233425048969
Replicate 34.4292670348013
Condition 3: 24 Hour
Replicate 14.3973466766781
Replicate 22.5018493298565
Replicate 32.8661414096723


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122251.p1 GENE.S_Transcript_122251~~S_Transcript_122251.p1 ORF type:complete len:308 (+),score=60.36,PPR_2|PF13041.2|1.4e-14,PPR_2|PF13041.2|1.5e-08,PPR_2|PF13041.2|1.4e-06,PPR_2|PF13041.2|1.7e-12,PPR_2|PF13041.2|8e-18,PPR_2|PF13041.2|2.5e-18,PPR_2|PF13041.2|5.8e-17,PPR_2|PF13041.2|2.3e-05,PPR_1|PF12854.3|7.2e-10,PPR_1|PF12854.3|1.1e-05,PPR_1|PF12854.3|1.2e-08,PPR_1|PF12854.3|0.0047,PPR_1|PF12854.3|1e-13,PPR_1|PF12854.3|9e-11,PPR_1|PF12854.3|4.1e-14,PPR_1|PF12854.3|0.00031,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|0.00046,PPR|PF01535.16|4.5e-06,PPR|PF01535.16|0.0039,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|3e-06,PPR|PF01535.16|1.4e-10,PPR|PF01535.16|0.0017,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.00028,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|8.7e-06,PPR_3|PF13812.2|0.0049,PPR_3|PF13812.2|8.2e-05,PPR_3|PF13812.2|0.33,MRP-S27|PF10037.5|4.5e+02,MRP-S27|PF10037.5|0.00031,MRP-S27|PF10037.5|0.14,MRP-S27|PF10037.5|6.4,DUF3368|PF11848.4|7.8e+02,DUF3368|PF11848.4|5.1e+02,DUF3368|PF11848.4|2.5e+02,DUF3368|PF11848.4|1.3e+03,DUF3368|PF11848.4|0.0011,ATP13|PF12921.3|29,ATP13|PF12921.3|1e+02,ATP13|PF12921.3|62,ATP13|PF12921.3|0.16 S_Transcript_122251:72-995(+)
ATGGACAATTCTGCCCTTTGTAAGCCCGACCTTGTCATTTACAGCACTATTATTGACAGTTTTTGTAAAGACAGGCTGTTGAATGAGGCCTTAAAGCTCTCCTCCGAGATGAAGGGCAAGGGCATTTCACGTGATGTCTACACTTACACCTCTTTGGTTCGAGGATTCTTTAATTTGGGCCTCAGAGAAGAAGCTATGGCCTTGTTGGCTGACATGTTGGAGAGTAGCATTTCACCAGATGTTCAGACCTTCAACATGCTAGTGGACATGTGCTGCAAAGATGGCAGGGTGGAGGAAGCAAAATCCATAATCGACTTCATGATTGAGAGAGATGGCTTGTGTAAAGCTAGAAAGCTGGTAGCTGCCCGTCAGATGTTTGATGAGATGCAGGTCAATGGAGTTACTCCTAATGTGGTGACTTATGCTTCATTGCTTGATGGCCTCTGCAAAAACGCACAGCTCGATGAGGCAATGGAAGTCTTGAGGGAGATGAATTCCAAGGGAGTGCGCCCTGATCTCATCATCTACAATATCTTAATTGACGGTCTTTGTGAGGCTGGTTTTCTTAAAGATGCATTAGATGTCTTCTCCAGTCTCTCGTCAAAGGGTTTACAGCCAAATCATTGGACATACAACATAATGATCAAAGGACTCTGTAAGCAAGGGCTACTAAACGAGGCAAATGAGCTGTTCAAGAAAATGGAGGACAATGGCTGTTATCCCAATGATGCTACCTACAACACAATTATTCGGGGATACCTTTATGCTAATGATATCAGGAAGACCTTGGAGTTTGTGAGCAGTATGAGGAGCAAAGGATATGCCGCAGATAACCACACTATCTCCTTATTTGCAGACTTACTGTCTACTAATGACATTAGTGACGCCAACAGGGAATTGCTTCGAACTTTTTTTGCAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122251.p1 GENE.S_Transcript_122251~~S_Transcript_122251.p1 ORF type:complete len:308 (+),score=60.36,PPR_2|PF13041.2|1.4e-14,PPR_2|PF13041.2|1.5e-08,PPR_2|PF13041.2|1.4e-06,PPR_2|PF13041.2|1.7e-12,PPR_2|PF13041.2|8e-18,PPR_2|PF13041.2|2.5e-18,PPR_2|PF13041.2|5.8e-17,PPR_2|PF13041.2|2.3e-05,PPR_1|PF12854.3|7.2e-10,PPR_1|PF12854.3|1.1e-05,PPR_1|PF12854.3|1.2e-08,PPR_1|PF12854.3|0.0047,PPR_1|PF12854.3|1e-13,PPR_1|PF12854.3|9e-11,PPR_1|PF12854.3|4.1e-14,PPR_1|PF12854.3|0.00031,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|0.00046,PPR|PF01535.16|4.5e-06,PPR|PF01535.16|0.0039,PPR|PF01535.16|1.4e-07,PPR|PF01535.16|3e-06,PPR|PF01535.16|1.4e-10,PPR|PF01535.16|0.0017,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.00028,PPR_3|PF13812.2|0.011,PPR_3|PF13812.2|8.7e-06,PPR_3|PF13812.2|0.0049,PPR_3|PF13812.2|8.2e-05,PPR_3|PF13812.2|0.33,MRP-S27|PF10037.5|4.5e+02,MRP-S27|PF10037.5|0.00031,MRP-S27|PF10037.5|0.14,MRP-S27|PF10037.5|6.4,DUF3368|PF11848.4|7.8e+02,DUF3368|PF11848.4|5.1e+02,DUF3368|PF11848.4|2.5e+02,DUF3368|PF11848.4|1.3e+03,DUF3368|PF11848.4|0.0011,ATP13|PF12921.3|29,ATP13|PF12921.3|1e+02,ATP13|PF12921.3|62,ATP13|PF12921.3|0.16 S_Transcript_122251:72-995(+)
MDNSALCKPDLVIYSTIIDSFCKDRLLNEALKLSSEMKGKGISRDVYTYTSLVRGFFNLGLREEAMALLADMLESSISPDVQTFNMLVDMCCKDGRVEEAKSIIDFMIERDGLCKARKLVAARQMFDEMQVNGVTPNVVTYASLLDGLCKNAQLDEAMEVLREMNSKGVRPDLIIYNILIDGLCEAGFLKDALDVFSSLSSKGLQPNHWTYNIMIKGLCKQGLLNEANELFKKMEDNGCYPNDATYNTIIRGYLYANDIRKTLEFVSSMRSKGYAADNHTISLFADLLSTNDISDANRELLRTFFAV*

Click here to download the sequence:
Link to NCBI Protein BLAST