Transcript Information: S_Transcript_122252.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value2E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3419441086959
Replicate 21.8826913755746
Replicate 32.754115255151
Condition 2: 8 Hour
Replicate 11.9335020554201
Replicate 21.6704313650996
Replicate 31.6484255481186
Condition 3: 24 Hour
Replicate 12.388373928305
Replicate 21.8131049261078
Replicate 32.7576101882927


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122252.p1 GENE.S_Transcript_122252~~S_Transcript_122252.p1 ORF type:complete len:375 (+),score=78.29,PPR_2|PF13041.2|4.7e-14,PPR_2|PF13041.2|1.9e-08,PPR_2|PF13041.2|1.6e-11,PPR_2|PF13041.2|6.6e-17,PPR_2|PF13041.2|1.5e-18,PPR_2|PF13041.2|8.1e-20,PPR_2|PF13041.2|3.4e-16,PPR_2|PF13041.2|1.2e-14,PPR_2|PF13041.2|1e-17,PPR_2|PF13041.2|5.8e-05,PPR_1|PF12854.3|4.6e-05,PPR_1|PF12854.3|2.9e-06,PPR_1|PF12854.3|4.5e-08,PPR_1|PF12854.3|1.8e-10,PPR_1|PF12854.3|4.7e-10,PPR_1|PF12854.3|7.2e-14,PPR_1|PF12854.3|9.4e-13,PPR_1|PF12854.3|2.3e-09,PPR_1|PF12854.3|1.2e-12,PPR_1|PF12854.3|3.6e-07,PPR|PF01535.16|5.7e-06,PPR|PF01535.16|0.00099,PPR|PF01535.16|5.9e-06,PPR|PF01535.16|5.8e-08,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|7.5e-07,PPR|PF01535.16|3.3e-05,PPR|PF01535.16|3e-11,PPR|PF01535.16|0.00013,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.00029,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|0.00029,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|6.7e-06,PPR_3|PF13812.2|0.00052,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|4.2e-05,PPR_3|PF13812.2|0.0061,MRP-S27|PF10037.5|0.0011,MRP-S27|PF10037.5|0.49,MRP-S27|PF10037.5|0.62,MRP-S27|PF10037.5|2.7,MRP-S27|PF10037.5|56 S_Transcript_122252:62-1126(+)
ATGAAGGGCAAGGGCATTTCACCTAATGTCCACACTTACACCTCTTTGGTTCGAGGATTCTTTAATTTGGGCCTCAGAGAAGAAGCTATGGCCTTGTTGGCTGACATGTTGGAGAGTAGCATTTCACCAGATGTTCAGACCTTCAGCATGCTTGTAGACATGTGTTGCAAAGATGGCAGGGTGGAAGAAGCAAAGTCCGTAATCGACTTCATGATTGAGAGAGGTGAGGCTCCAAACATCATTACCTACAGTTCTCTCTTGGATGGATACTGTTTACGTGGCCAAATGGATGAGGCATCCAAGTTACTTGATTTCATGCTCAAACGTGGTTTCCATCCTAATGTTGTGACCTTTTCCACTTTGATAAACGGATTTATCAAGGCTAAAAACATTGACAAAGGTTTCAAAGTTTTTCAGGAAATGTCTTGTCATGGGATTGTACCTAATGTTGCTACCTACACCACTCTTATTGATGGCTTGTGTAAAGCTAGAAAGCTGCAAGCTGCCCGTCAGATGTTTGACGAAATGCAGGTCAATGGAGTTGCTCCTAATGTAGTGACTTATGCATCATTGCTTGATGGCTTATGCAAAAACGCACAGTTTGATGAGGCAATGGAATTCTTGAGGGAGATGAATGGCAAGGGAGTGCACCCTAATCTCACCATCTACAATATATTAATTGATGGTCTTTGTGAGGCTGGGTTTCTTAAAGATGCATCAAATGTCTTCTCCAGTCTCCTGTCTAAGGGTTTGCGGCTAGATAATCAGACGTACAACATAATGATCAAAGGATATTGTAAGAAAGGACTACTAAACGAAGCAAATGAGCTGTTCAAGAAGATGGAGGACAATGGATGTCCACCAGATGATTGCACCTACAACACAATCATTCGTGGTCATCTTTCTGCCAATAATATTAGGAAGGCCTTGGAGCTTGTGACCAGTATGAGGAGCGAAGGAAATGCGGCAGAGAATCACATAATCACCTTATTTGCTAATTTACTCTCTGCTAATAAGATTAGTGATGTTGACGGGGAATTGCTGCAAACATTTTTCGCAACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122252.p1 GENE.S_Transcript_122252~~S_Transcript_122252.p1 ORF type:complete len:375 (+),score=78.29,PPR_2|PF13041.2|4.7e-14,PPR_2|PF13041.2|1.9e-08,PPR_2|PF13041.2|1.6e-11,PPR_2|PF13041.2|6.6e-17,PPR_2|PF13041.2|1.5e-18,PPR_2|PF13041.2|8.1e-20,PPR_2|PF13041.2|3.4e-16,PPR_2|PF13041.2|1.2e-14,PPR_2|PF13041.2|1e-17,PPR_2|PF13041.2|5.8e-05,PPR_1|PF12854.3|4.6e-05,PPR_1|PF12854.3|2.9e-06,PPR_1|PF12854.3|4.5e-08,PPR_1|PF12854.3|1.8e-10,PPR_1|PF12854.3|4.7e-10,PPR_1|PF12854.3|7.2e-14,PPR_1|PF12854.3|9.4e-13,PPR_1|PF12854.3|2.3e-09,PPR_1|PF12854.3|1.2e-12,PPR_1|PF12854.3|3.6e-07,PPR|PF01535.16|5.7e-06,PPR|PF01535.16|0.00099,PPR|PF01535.16|5.9e-06,PPR|PF01535.16|5.8e-08,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|7.5e-07,PPR|PF01535.16|3.3e-05,PPR|PF01535.16|3e-11,PPR|PF01535.16|0.00013,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.00029,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|0.00029,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|6.7e-06,PPR_3|PF13812.2|0.00052,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|4.2e-05,PPR_3|PF13812.2|0.0061,MRP-S27|PF10037.5|0.0011,MRP-S27|PF10037.5|0.49,MRP-S27|PF10037.5|0.62,MRP-S27|PF10037.5|2.7,MRP-S27|PF10037.5|56 S_Transcript_122252:62-1126(+)
MKGKGISPNVHTYTSLVRGFFNLGLREEAMALLADMLESSISPDVQTFSMLVDMCCKDGRVEEAKSVIDFMIERGEAPNIITYSSLLDGYCLRGQMDEASKLLDFMLKRGFHPNVVTFSTLINGFIKAKNIDKGFKVFQEMSCHGIVPNVATYTTLIDGLCKARKLQAARQMFDEMQVNGVAPNVVTYASLLDGLCKNAQFDEAMEFLREMNGKGVHPNLTIYNILIDGLCEAGFLKDASNVFSSLLSKGLRLDNQTYNIMIKGYCKKGLLNEANELFKKMEDNGCPPDDCTYNTIIRGHLSANNIRKALELVTSMRSEGNAAENHIITLFANLLSANKISDVDGELLQTFFAT*

Click here to download the sequence:
Link to NCBI Protein BLAST