Transcript Information: S_Transcript_122253.p1


Annotated TAIR IDAT1G63080.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23388884-23390728 | Reverse length=614
E-Value9E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28616130360409
Replicate 20.35585144447604
Replicate 30.19830899014624
Condition 2: 8 Hour
Replicate 10
Replicate 20.60139378063781
Replicate 30.11460133120958
Condition 3: 24 Hour
Replicate 10.70467366098691
Replicate 20.3655453480056
Replicate 30.81361433564891


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122253.p1 GENE.S_Transcript_122253~~S_Transcript_122253.p1 ORF type:complete len:186 (+),score=36.53,PPR_2|PF13041.2|0.0057,PPR_2|PF13041.2|8.9e-13,PPR_2|PF13041.2|3.7e-16,PPR_2|PF13041.2|4.3e-17,PPR_1|PF12854.3|5.4e-06,PPR_1|PF12854.3|5.8e-09,PPR_1|PF12854.3|1.3e-10,PPR_1|PF12854.3|1.7e-05,PPR|PF01535.16|0.00022,PPR|PF01535.16|4.2e-07,PPR|PF01535.16|1.3e-07,PPR|PF01535.16|0.92,PPR|PF01535.16|2.1e+03,PPR_3|PF13812.2|0.00013,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|6.8e-05,PPR_3|PF13812.2|15,MRP-S27|PF10037.5|4.9e-05,MRP-S27|PF10037.5|8.3 S_Transcript_122253:316-873(+)
ATGAAGGGCAAGGGCATTTCACGTGATGTCTACACTTACACCTCTTTGGTTCGAGGATTCTTTAATTTGGGCCTCAGAGAAGAAGCTATGGCCTTGTTGGCTGACATGTTGGAGAGTAGCATTTCACCAGATGTTCAGACCTTCAACATGCTAGTGGACATGTGCTGCAAAGATGGCAGGGTGGAGGAAGCAAAATCCATAATCGACTTCATGATTGAGAGAGGTGAGGCTCCAAACATCATTACTTACAATGCTCTCTTGGATGGATATTGTTTACGAGGCCAAATGGACGAGGCATCCAAGTTACTTGATTTCTTGGTCAAACGTGGTGTCCATCCTAATGTTGTGACCTTGAACACTTTGATCAATGGTTTTGTCAAAGCTAAAAAAAAGTTGACAAAGCCATCAAAATTTTCCAGCAAATTCCTTGTCATGGGATTGTACCTAATGTTGCTACCTACACCACTCTTATTGATGGCTTGTGTAAAGCTAGAAAGCTGCAAGCTGCTCGTCAGATGTTTGATGAAATGCAGGTTAATGGAGTTGCTCCAGATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122253.p1 GENE.S_Transcript_122253~~S_Transcript_122253.p1 ORF type:complete len:186 (+),score=36.53,PPR_2|PF13041.2|0.0057,PPR_2|PF13041.2|8.9e-13,PPR_2|PF13041.2|3.7e-16,PPR_2|PF13041.2|4.3e-17,PPR_1|PF12854.3|5.4e-06,PPR_1|PF12854.3|5.8e-09,PPR_1|PF12854.3|1.3e-10,PPR_1|PF12854.3|1.7e-05,PPR|PF01535.16|0.00022,PPR|PF01535.16|4.2e-07,PPR|PF01535.16|1.3e-07,PPR|PF01535.16|0.92,PPR|PF01535.16|2.1e+03,PPR_3|PF13812.2|0.00013,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|6.8e-05,PPR_3|PF13812.2|15,MRP-S27|PF10037.5|4.9e-05,MRP-S27|PF10037.5|8.3 S_Transcript_122253:316-873(+)
MKGKGISRDVYTYTSLVRGFFNLGLREEAMALLADMLESSISPDVQTFNMLVDMCCKDGRVEEAKSIIDFMIERGEAPNIITYNALLDGYCLRGQMDEASKLLDFLVKRGVHPNVVTLNTLINGFVKAKKKLTKPSKFSSKFLVMGLYLMLLPTPLLLMACVKLESCKLLVRCLMKCRLMELLQM*

Click here to download the sequence:
Link to NCBI Protein BLAST