Transcript Information: S_Transcript_122254.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value2E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39602680409495
Replicate 20.19698919247781
Replicate 30.16466728646072
Condition 2: 8 Hour
Replicate 10.76162108275475
Replicate 20.73241171141962
Replicate 30.63440022633873
Condition 3: 24 Hour
Replicate 10.45510173938738
Replicate 20.74197002184471
Replicate 30.22519682504568


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122254.p1 GENE.S_Transcript_122254~~S_Transcript_122254.p1 ORF type:3prime_partial len:336 (-),score=72.64,PPR_2|PF13041.2|4.5e-08,PPR_2|PF13041.2|4.4e-13,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|8.9e-11,PPR_2|PF13041.2|9.1e-20,PPR_2|PF13041.2|4.9e-20,PPR_2|PF13041.2|2.1e-17,PPR_2|PF13041.2|2.9e-18,PPR_2|PF13041.2|5.8e-17,PPR_2|PF13041.2|0.002,PPR_1|PF12854.3|16,PPR_1|PF12854.3|1.4e-05,PPR_1|PF12854.3|3.9e-08,PPR_1|PF12854.3|1.5e-09,PPR_1|PF12854.3|2.7e-11,PPR_1|PF12854.3|3.9e-14,PPR_1|PF12854.3|1.1e-13,PPR_1|PF12854.3|1e-10,PPR_1|PF12854.3|4.6e-14,PPR_1|PF12854.3|0.00034,PPR|PF01535.16|0.18,PPR|PF01535.16|0.0027,PPR|PF01535.16|5.1e-06,PPR|PF01535.16|5.4e-07,PPR|PF01535.16|3.8e-08,PPR|PF01535.16|7.8e-09,PPR|PF01535.16|1.6e-07,PPR|PF01535.16|3.4e-06,PPR|PF01535.16|1.5e-10,PPR|PF01535.16|0.0019,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|0.0063,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|0.00062,PPR_3|PF13812.2|0.00024,PPR_3|PF13812.2|4.7e-05,PPR_3|PF13812.2|9.8e-06,PPR_3|PF13812.2|0.0056,PPR_3|PF13812.2|9.2e-05,PPR_3|PF13812.2|0.37,MRP-S27|PF10037.5|0.002,MRP-S27|PF10037.5|0.2,MRP-S27|PF10037.5|0.079,MRP-S27|PF10037.5|0.22,MRP-S27|PF10037.5|99,DUF3368|PF11848.4|8.5e+03,DUF3368|PF11848.4|2.8e+02,DUF3368|PF11848.4|1.3e+03,DUF3368|PF11848.4|1.7e+03,DUF3368|PF11848.4|2.8e+02,DUF3368|PF11848.4|1.5e+03,DUF3368|PF11848.4|0.0012,ATP13|PF12921.3|99,ATP13|PF12921.3|1.4,ATP13|PF12921.3|62,ATP13|PF12921.3|0.48 S_Transcript_122254:1-888(-)
ATGGCCTTGTTGGCTGACATGTTGGAGAGTAGCATTTCACCAGATGTTCAGACCTTCAGCATGCTAGTGGACATGTGTTGCAAAGATGGAAGGGTGGAGGAAGCAAAGTCCGTAATCGACTTCATGATTGAGAGAGGTGAGGCTCCAAACATCATTACCTACAATTCTCTCTTGGATGGATACTGTTTACGTGGCCAAATGGATGAGGCATCCAAGTCACTTGATTTCATGCTCAAAAGTGGTTTCCATCCTGATGTTGTGACCTTGAACACCTTGATCAACGGATTTGTCAAAGCTAAAATGATTGACAAAGCCATCAAAGTTTTCAAGGAAATGTCTTGTCAAGGGATTGTGCCTGATGTTACTACGTACAATACTCTTATAGATGGCTTGTGTAAAGCTAGAAAGCTGGTAGCTGCCCGTCAGATGTTTGATGAGATGCAGGTCAATGGAGTTACTCCTAATGTGGTGACTTATGCTTCATTGCTTGATGGCCTCTGCAAAAACGCACAGCTCGATGAGGCAATGGAAGTCTTGAGGGAGATGAATTCCAAGGGAGTGCGCCCTGATCTCATCATCTACAATATCTTAATTGACGGTCTTTGTGAGGCTGGTTTTCTTAAAGATGCATTAGATGTCTTCTCCAGTCTCTCGTCAAAGGGTTTACAGCCAAATCATTGGACATACAACATAATGATCAAAGGACTCTGTAAGCAAGGGCTACTAAACGAGGCAAATGAGCTGTTCAAGAAAATGGAGGACAATGGCTGTTATCCCAATGATGCTACCTACAACACAATTATTCGGGGATACCTTTATGCTAATGATATCAGGAAGACCTTGGAGTTTGTGAGCAGTATGAGGAGCAAAGGATATGCCGCAGATAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122254.p1 GENE.S_Transcript_122254~~S_Transcript_122254.p1 ORF type:3prime_partial len:336 (-),score=72.64,PPR_2|PF13041.2|4.5e-08,PPR_2|PF13041.2|4.4e-13,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|8.9e-11,PPR_2|PF13041.2|9.1e-20,PPR_2|PF13041.2|4.9e-20,PPR_2|PF13041.2|2.1e-17,PPR_2|PF13041.2|2.9e-18,PPR_2|PF13041.2|5.8e-17,PPR_2|PF13041.2|0.002,PPR_1|PF12854.3|16,PPR_1|PF12854.3|1.4e-05,PPR_1|PF12854.3|3.9e-08,PPR_1|PF12854.3|1.5e-09,PPR_1|PF12854.3|2.7e-11,PPR_1|PF12854.3|3.9e-14,PPR_1|PF12854.3|1.1e-13,PPR_1|PF12854.3|1e-10,PPR_1|PF12854.3|4.6e-14,PPR_1|PF12854.3|0.00034,PPR|PF01535.16|0.18,PPR|PF01535.16|0.0027,PPR|PF01535.16|5.1e-06,PPR|PF01535.16|5.4e-07,PPR|PF01535.16|3.8e-08,PPR|PF01535.16|7.8e-09,PPR|PF01535.16|1.6e-07,PPR|PF01535.16|3.4e-06,PPR|PF01535.16|1.5e-10,PPR|PF01535.16|0.0019,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|0.0063,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|0.00062,PPR_3|PF13812.2|0.00024,PPR_3|PF13812.2|4.7e-05,PPR_3|PF13812.2|9.8e-06,PPR_3|PF13812.2|0.0056,PPR_3|PF13812.2|9.2e-05,PPR_3|PF13812.2|0.37,MRP-S27|PF10037.5|0.002,MRP-S27|PF10037.5|0.2,MRP-S27|PF10037.5|0.079,MRP-S27|PF10037.5|0.22,MRP-S27|PF10037.5|99,DUF3368|PF11848.4|8.5e+03,DUF3368|PF11848.4|2.8e+02,DUF3368|PF11848.4|1.3e+03,DUF3368|PF11848.4|1.7e+03,DUF3368|PF11848.4|2.8e+02,DUF3368|PF11848.4|1.5e+03,DUF3368|PF11848.4|0.0012,ATP13|PF12921.3|99,ATP13|PF12921.3|1.4,ATP13|PF12921.3|62,ATP13|PF12921.3|0.48 S_Transcript_122254:1-888(-)
MALLADMLESSISPDVQTFSMLVDMCCKDGRVEEAKSVIDFMIERGEAPNIITYNSLLDGYCLRGQMDEASKSLDFMLKSGFHPDVVTLNTLINGFVKAKMIDKAIKVFKEMSCQGIVPDVTTYNTLIDGLCKARKLVAARQMFDEMQVNGVTPNVVTYASLLDGLCKNAQLDEAMEVLREMNSKGVRPDLIIYNILIDGLCEAGFLKDALDVFSSLSSKGLQPNHWTYNIMIKGLCKQGLLNEANELFKKMEDNGCYPNDATYNTIIRGYLYANDIRKTLEFVSSMRSKGYAADN

Click here to download the sequence:
Link to NCBI Protein BLAST