Transcript Information: S_Transcript_122255.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value6E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.76078584681086
Replicate 30.15898910416897
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.65229425185645


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122255.p1 GENE.S_Transcript_122255~~S_Transcript_122255.p1 ORF type:internal len:232 (-),score=50.13,PPR_2|PF13041.2|9.9e-07,PPR_2|PF13041.2|3.8e-11,PPR_2|PF13041.2|2.7e-20,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|1.6e-18,PPR_2|PF13041.2|3.3e-17,PPR_2|PF13041.2|0.0012,PPR_1|PF12854.3|3.3e-08,PPR_1|PF12854.3|0.32,PPR_1|PF12854.3|2.3e-14,PPR_1|PF12854.3|6.7e-14,PPR_1|PF12854.3|6e-11,PPR_1|PF12854.3|2.7e-14,PPR_1|PF12854.3|0.00021,PPR|PF01535.16|5e-06,PPR|PF01535.16|0.1,PPR|PF01535.16|4.6e-09,PPR|PF01535.16|9.5e-08,PPR|PF01535.16|2e-06,PPR|PF01535.16|9.1e-11,PPR|PF01535.16|0.0011,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|2.7e-05,PPR_3|PF13812.2|5.7e-06,PPR_3|PF13812.2|0.0033,PPR_3|PF13812.2|5.4e-05,PPR_3|PF13812.2|0.22,MRP-S27|PF10037.5|9.1,MRP-S27|PF10037.5|0.49,MRP-S27|PF10037.5|0.12,MRP-S27|PF10037.5|51,DUF3368|PF11848.4|2.9e+02,DUF3368|PF11848.4|2.7e+03,DUF3368|PF11848.4|1.7e+02,DUF3368|PF11848.4|8.3e+02,DUF3368|PF11848.4|0.0007 S_Transcript_122255:1-693(-)
TCACCAGATGTTCAGACCTTCAACATGCTAGTGGACATGTGCTGCAAAGATGGCAGGGTGGAGGAAGCAAAATCCATAATCGACTTCATGATTGAGAGAGCTAAAATGATTGACAAAGCCATCAAAGTTTTCAAGGAAATGTCTTGTCAAGGGATTGTGCCTGATGTTACTACGTACAATACTCTTATAGATGGCTTGTGTAAAGCTAGAAAGCTGGTAGCTGCCCGTCAGATGTTTGATGAGATGCAGGTCAATGGAGTTACTCCTAATGTGGTGACTTATGCTTCATTGCTTGATGGCCTCTGCAAAAACGCACAGCTCGATGAGGCAATGGAAGTCTTGAGGGAGATGAATTCCAAGGGAGTGCGCCCTGATCTCATCATCTACAATATCTTAATTGACGGTCTTTGTGAGGCTGGTTTTCTTAAAGATGCATTAGATGTCTTCTCCAGTCTCTCGTCAAAGGGTTTACAGCCAAATCATTGGACATACAACATAATGATCAAAGGACTCTGTAAGCAAGGGCTACTAAACGAGGCAAATGAGCTGTTCAAGAAAATGGAGGACAATGGCTGTTATCCCAATGATGCTACCTACAACACAATTATTCGGGGATACCTTTATGCTAATGATATCAGGAAGACCTTGGAGTTTGTGAGCAGTATGAGGAGCAAAGGATATGCCGCAGATAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122255.p1 GENE.S_Transcript_122255~~S_Transcript_122255.p1 ORF type:internal len:232 (-),score=50.13,PPR_2|PF13041.2|9.9e-07,PPR_2|PF13041.2|3.8e-11,PPR_2|PF13041.2|2.7e-20,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|1.6e-18,PPR_2|PF13041.2|3.3e-17,PPR_2|PF13041.2|0.0012,PPR_1|PF12854.3|3.3e-08,PPR_1|PF12854.3|0.32,PPR_1|PF12854.3|2.3e-14,PPR_1|PF12854.3|6.7e-14,PPR_1|PF12854.3|6e-11,PPR_1|PF12854.3|2.7e-14,PPR_1|PF12854.3|0.00021,PPR|PF01535.16|5e-06,PPR|PF01535.16|0.1,PPR|PF01535.16|4.6e-09,PPR|PF01535.16|9.5e-08,PPR|PF01535.16|2e-06,PPR|PF01535.16|9.1e-11,PPR|PF01535.16|0.0011,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|2.7e-05,PPR_3|PF13812.2|5.7e-06,PPR_3|PF13812.2|0.0033,PPR_3|PF13812.2|5.4e-05,PPR_3|PF13812.2|0.22,MRP-S27|PF10037.5|9.1,MRP-S27|PF10037.5|0.49,MRP-S27|PF10037.5|0.12,MRP-S27|PF10037.5|51,DUF3368|PF11848.4|2.9e+02,DUF3368|PF11848.4|2.7e+03,DUF3368|PF11848.4|1.7e+02,DUF3368|PF11848.4|8.3e+02,DUF3368|PF11848.4|0.0007 S_Transcript_122255:1-693(-)
SPDVQTFNMLVDMCCKDGRVEEAKSIIDFMIERAKMIDKAIKVFKEMSCQGIVPDVTTYNTLIDGLCKARKLVAARQMFDEMQVNGVTPNVVTYASLLDGLCKNAQLDEAMEVLREMNSKGVRPDLIIYNILIDGLCEAGFLKDALDVFSSLSSKGLQPNHWTYNIMIKGLCKQGLLNEANELFKKMEDNGCYPNDATYNTIIRGYLYANDIRKTLEFVSSMRSKGYAADN

Click here to download the sequence:
Link to NCBI Protein BLAST