Transcript Information: S_Transcript_122339.p1


Annotated TAIR IDAT2G36660.1
Annotated Gene Namepoly(A) binding protein 7
Annotated Gene Symbol(s)PAB7
Annotation TypeOrtholog
Chromosome Positionchr2:15361476-15364398 | Reverse length=609
E-Value3.9E-199
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4103572367598
Replicate 210.837242230651
Replicate 310.711541117355
Condition 2: 8 Hour
Replicate 14.0262336918747
Replicate 24.9039092218281
Replicate 35.6614891238831
Condition 3: 24 Hour
Replicate 111.813712991713
Replicate 212.184065103444
Replicate 310.492370472528


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122339.p1 GENE.S_Transcript_122339~~S_Transcript_122339.p1 ORF type:complete len:625 (+),score=148.02,RRM_1|PF00076.18|4.9e-14,RRM_1|PF00076.18|7.8e-22,RRM_1|PF00076.18|8.6e-20,RRM_1|PF00076.18|4.2e-17,RRM_6|PF14259.2|4.5e-09,RRM_6|PF14259.2|1.2e-13,RRM_6|PF14259.2|3.5e-12,RRM_6|PF14259.2|8e-12,RRM_5|PF13893.2|1.2,RRM_5|PF13893.2|9.3e-10,RRM_5|PF13893.2|7e-07,RRM_5|PF13893.2|2.5e-06,PABP|PF00658.14|8.2e-30,RRM_occluded|PF16842.1|0.024,RRM_occluded|PF16842.1|2.9e+02,RRM_occluded|PF16842.1|0.13,Nup35_RRM_2|PF14605.2|2.6e+03,Nup35_RRM_2|PF14605.2|7.5e+02,Nup35_RRM_2|PF14605.2|0.18,Nup35_RRM_2|PF14605.2|0.037 S_Transcript_122339:315-2189(+)
ATGGAGGTGGCAACGACAGTGCCGGCAGCACAGGCGTCACTTTACGTTGGAGACTTGCACCCTGACGTCAGCGACGGGCAGCTATTGGACATCTTCACGGAATTCAAGTCTCTGACGTCAGTTCTTGTTTGTCGCGATTCTTCTACTGGCCGTTCCCTCTGTTATGGCTACCTCAATTTCCTCTCCCCCTCTGACGCAATTCAAGCTATTGAGGTGAAGAATCATACTGTGTTGAATGGAAAAGCAATAAGGGTGATGTGGTCACTTCGTGATCCTGATTCTAGAAGAAGCGGAGTTGGCAATGTGTTTGTTAAGAATCTTGGTGATTCCATTGATAGTGCAAAGCTGCAGGAGACTTTTGAGAAATTCGGGGATATATCTTCTTGTAAAGTTGTTACTTCTGAGGACGGAAAGAGCAAAGGGTACGGTTTTGTTCAATTTGTAACTGAGGAATCTGCAAATGCTGCTATCGAAAATTTGAATGGGACAAATCTTGAAGGCAAACAAATATATGTTGGTAAATTTGTCAAAAGAACAGAAAGGGCTTTACCTGGTGCTGATTTTAAATATACCAATCTGTACATGAAGAATGTGGATCCAGATATCACTGATGAAGTTCTGTGCGAGAAGTTTTCCGAATTTGGCAAAATTGTCAGCTTAGCAATTGCAAAGAATGAGAATGGGACCTCAAAAGGTTTTGGATTTGTTAACTTTGAGAACCCAGATGATGCAAAGAGAGCAATGGAAGCTATGGATGGGTTACTGCTTGGTTCTAAGACTCTTTATGTAGCAAGGGCACAAAAGAAGGCAGAGCGTGAACAGATTTTGCGACGCCAGTTTGAGGAGAAAATGAAGGAGCAGATGATGAACTATATGGGTTCAAACGTATATATTAAGAACATCAGTGATGTTGTAACTGAGGATGAGCTGCGGGAACTTTTCAGCCAGTGTGGCAATATAACTTCAGCCAAACTAATGCGTGATGACAAAGGAATAAGTAAGGGATTTGGGTTTGTGTGCTTCTCCAGTCCTGATGAGGCGAGCAAAGCTGTGCACATTTTTCATGGACATATGTTCTACAGGAAGCCCTTGTATGTCGCTATTGCTCAAAGGAAGGAAGACAGACAAGCTCAGTTGCAGCTCCAGTATGCACAGCGCTTGGCTGGACTTCCTGGACTATCAAGTGCAGTGATCCCAGGAGGATACCCCCATTTTTACTATACTTCTCCTGGTGTTGTATCGCAAGTACCACCCCGACAAGGCTTGATGTATCAAACTCTAGGAGTGAGGCCAGGGTGGCGGGGTAATGGCTTTGCACCTGTAAGCCGTCCTCCTTTTCAACCATCACCAGTTACTACACTCCCCAATAATGGAAGGCCAAAGAAGCAGAATCGGGCTAGAGTTAGTGGGCAAACACCTATGCAGAATGGAGTTCCAATTCAACCTTTTGCTTCACTCAAGGATTCAACCAATCAGCAGAGGGCTGGACAGGTTAAGTATGTGCCTAACACAAAGCGTGATGTGAACAAAACATCTGGAGTCCCATCAGCTGTTTCGAATAGAGTCAGCCCTGCTGAAGGACCAGACAATTTGAGTAGTATGCTTGCTGCAGCTGCCCCTCAGCAGCAGAAGCAGATACTTGGCGAGCGGCTTTATCCACTTGTCCACAGCCACAAGCCTGAACTTGCAGCAAAGATTACAGGCATGCTGTTGGAGATGGACAACACAGAGCTACTTCTGCTATTGGAGTCACCGGAATCATTAGCATCAAAGGTTGATGAAGCACTGCAGGTGCTCAAGCTTTCAAGAACCAAGATCTCAAATCAAGAGAATATTCATGCCAACTTCCTCAGTGCCGAGGTTGCTGTCAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122339.p1 GENE.S_Transcript_122339~~S_Transcript_122339.p1 ORF type:complete len:625 (+),score=148.02,RRM_1|PF00076.18|4.9e-14,RRM_1|PF00076.18|7.8e-22,RRM_1|PF00076.18|8.6e-20,RRM_1|PF00076.18|4.2e-17,RRM_6|PF14259.2|4.5e-09,RRM_6|PF14259.2|1.2e-13,RRM_6|PF14259.2|3.5e-12,RRM_6|PF14259.2|8e-12,RRM_5|PF13893.2|1.2,RRM_5|PF13893.2|9.3e-10,RRM_5|PF13893.2|7e-07,RRM_5|PF13893.2|2.5e-06,PABP|PF00658.14|8.2e-30,RRM_occluded|PF16842.1|0.024,RRM_occluded|PF16842.1|2.9e+02,RRM_occluded|PF16842.1|0.13,Nup35_RRM_2|PF14605.2|2.6e+03,Nup35_RRM_2|PF14605.2|7.5e+02,Nup35_RRM_2|PF14605.2|0.18,Nup35_RRM_2|PF14605.2|0.037 S_Transcript_122339:315-2189(+)
MEVATTVPAAQASLYVGDLHPDVSDGQLLDIFTEFKSLTSVLVCRDSSTGRSLCYGYLNFLSPSDAIQAIEVKNHTVLNGKAIRVMWSLRDPDSRRSGVGNVFVKNLGDSIDSAKLQETFEKFGDISSCKVVTSEDGKSKGYGFVQFVTEESANAAIENLNGTNLEGKQIYVGKFVKRTERALPGADFKYTNLYMKNVDPDITDEVLCEKFSEFGKIVSLAIAKNENGTSKGFGFVNFENPDDAKRAMEAMDGLLLGSKTLYVARAQKKAEREQILRRQFEEKMKEQMMNYMGSNVYIKNISDVVTEDELRELFSQCGNITSAKLMRDDKGISKGFGFVCFSSPDEASKAVHIFHGHMFYRKPLYVAIAQRKEDRQAQLQLQYAQRLAGLPGLSSAVIPGGYPHFYYTSPGVVSQVPPRQGLMYQTLGVRPGWRGNGFAPVSRPPFQPSPVTTLPNNGRPKKQNRARVSGQTPMQNGVPIQPFASLKDSTNQQRAGQVKYVPNTKRDVNKTSGVPSAVSNRVSPAEGPDNLSSMLAAAAPQQQKQILGERLYPLVHSHKPELAAKITGMLLEMDNTELLLLLESPESLASKVDEALQVLKLSRTKISNQENIHANFLSAEVAVN*

Click here to download the sequence:
Link to NCBI Protein BLAST