Transcript Information: S_Transcript_122377.p1


Annotated TAIR IDAT1G17370.1
Annotated Gene Nameoligouridylate binding protein 1B
Annotated Gene Symbol(s)UBP1B
Annotation TypeOrtholog
Chromosome Positionchr1:5951842-5954825 | Reverse length=419
E-Value2.2E-253
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1115.8485385522
Replicate 2117.21510471078
Replicate 3105.23722390832
Condition 2: 8 Hour
Replicate 1101.06820055513
Replicate 2103.85415043892
Replicate 399.558141301939
Condition 3: 24 Hour
Replicate 1114.34916500171
Replicate 2104.99467211317
Replicate 3104.23517877375


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122377.p1 GENE.S_Transcript_122377~~S_Transcript_122377.p1 ORF type:complete len:422 (+),score=73.73,RRM_1|PF00076.18|3.2e-12,RRM_1|PF00076.18|8e-19,RRM_1|PF00076.18|4.7e+03,RRM_1|PF00076.18|1.5e-11,RRM_6|PF14259.2|9.7e-06,RRM_6|PF14259.2|3.7e-11,RRM_6|PF14259.2|2e-08,RRM_5|PF13893.2|9.8e-08,RRM_5|PF13893.2|0.0023,RRM_5|PF13893.2|1.3e-05 S_Transcript_122377:241-1506(+)
ATGCAGAACCAGAGAATGAAGCAACAACAGCAAGCTTTGATGCAACAAGCTCTCCTTCAACAACAGTCTCTTTACCATCCCGGTCTTCTCGCTGCTCCTCAGATAGAGCCATACCCCAGTGGCAACCTTCTTCCAGGCTTCGATCCCTCTACATGCCGCAGTGTGTATGTGGGTAATATTCATCCTCAGGTCACAGAACCTTTACTTCAAGAGGTTTTTGCTAGTGCTGGCCCTGTCGAAGGTTGCAAGCTGATTAGAAAGGAAAAGTCATCCTATGGCTTCATTCACTACTATGATCGCAGATTTGCCAGCATGGCTATATTAACACTTAATGGGAGGCATTTGTTTGGGCAGCCTATAAAGGTTAATTGGGCATATACCAGTGGTCAACGAGAAGACACTTCAAACCACTTCAATGTGTTTGTTGGCGACCTGAGCCCTGAAGTTACCGACGCTATGCTGTTTGCTTGTTTTTCGGTCTATCCCAGTTGTTCAGATGCAAGGGTGATGTGGGATCAGAAAACAGGGCGCTCTAGGGGGTTTGGATTTGTTTCTTTCCGTAGCCAGCAGGATGCCCAAAGTGCCATTAATGACCTTACTGGAAAATGGCTTGGTAGTAGGCAGATACGTTGTAATTGGGCAACCAAAGGTGCTAATAACAATGATGACAAGCAGAGTTCTGATGCCAAAAGCGTGGTAGAATTGACGAACGGGTCATCAGAAGATGGTAAAGAGGCCTCAAACAGTGATGCCCCTGAAAACAATCCCCAATACACTACTGTATATGTTGGAAATCTTGCTCCCGAGACTACCCAGCTTGATCTCCATCGGCACTTCCACAATTTAGCAGCTGGGTCAATTGAAGAAGTAAGGGTCCAGCGTGACAAAGGTTTTGGTTTTGTCAGATACAGTACTCATACTGAGGCTGCTTTGGCCATTCAGTTGGGCAATACCCAGAATCTGCTTTTGAACAAGCAAATTAAGTGCTCATGGGGAAGCAAGCCAACCCCTCCAGGGACAGCCTCGAATCCACTCCCTCCACCCGCTCCCGCACCTCTAGGACTTTCTACTACAGATCTTCTGTCCTATGAGCGACAACTAGCAATGAGTAAGATGGGAGGAATGCATGCCCTAATGCATACCCAAGGACCACATCCTCTGAATAAGGCTAGTATGGGAATGACTGCTGCCGGAGCTAGCCAGGCTATTTATGATGGCGGTTTTCAGAATGTTGCAGCTGCTCAGCAAATGATGTATTACCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122377.p1 GENE.S_Transcript_122377~~S_Transcript_122377.p1 ORF type:complete len:422 (+),score=73.73,RRM_1|PF00076.18|3.2e-12,RRM_1|PF00076.18|8e-19,RRM_1|PF00076.18|4.7e+03,RRM_1|PF00076.18|1.5e-11,RRM_6|PF14259.2|9.7e-06,RRM_6|PF14259.2|3.7e-11,RRM_6|PF14259.2|2e-08,RRM_5|PF13893.2|9.8e-08,RRM_5|PF13893.2|0.0023,RRM_5|PF13893.2|1.3e-05 S_Transcript_122377:241-1506(+)
MQNQRMKQQQQALMQQALLQQQSLYHPGLLAAPQIEPYPSGNLLPGFDPSTCRSVYVGNIHPQVTEPLLQEVFASAGPVEGCKLIRKEKSSYGFIHYYDRRFASMAILTLNGRHLFGQPIKVNWAYTSGQREDTSNHFNVFVGDLSPEVTDAMLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCNWATKGANNNDDKQSSDAKSVVELTNGSSEDGKEASNSDAPENNPQYTTVYVGNLAPETTQLDLHRHFHNLAAGSIEEVRVQRDKGFGFVRYSTHTEAALAIQLGNTQNLLLNKQIKCSWGSKPTPPGTASNPLPPPAPAPLGLSTTDLLSYERQLAMSKMGGMHALMHTQGPHPLNKASMGMTAAGASQAIYDGGFQNVAAAQQMMYYH*

Click here to download the sequence:
Link to NCBI Protein BLAST