Transcript Information: S_Transcript_122485.p1


Annotated TAIR IDAT3G49055.1
Annotated Gene Nameunknown protein; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24560.1); Has 52205 Blast hits to 29376 proteins in 1994 species: Archae - 873; Bacteria - 6150; Metazoa - 27099; Fungi - 3784; Plants - 3062; Viruses - 130; Other Eukaryotes - 11107 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18185166-18186968 | Reverse length=480
E-Value2E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.50531015003507
Replicate 20.97746536014306
Replicate 31.517440310676
Condition 2: 8 Hour
Replicate 12.6994164958396
Replicate 21.4159397873245
Replicate 31.079283423037
Condition 3: 24 Hour
Replicate 12.4886576128525
Replicate 21.1475347633594
Replicate 32.3944978865617


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122485.p1 GENE.S_Transcript_122485~~S_Transcript_122485.p1 ORF type:5prime_partial len:158 (+),score=40.64 S_Transcript_122485:2-475(+)
CAAAAGAGAATACAGTCAGAAAATGTGGAGCAACTCTTGGTTGAAATAAAAGCAACTGAAGAGGATGTTGAGAGATGGAGAGAAGCCTGTGAATTAGAAGTAGAAGCTGGAAAGCGTACTGTTGCGGAGCGTAATAAAGTGATCGCTATACTACAAAAGGAGCTAGAGAAAACGAAGGTTGCTTTGAAAGCCTCTGACAGCAAGTTAAAGTTGAAGGAAGATCTAGCAGTTGCTGCAATGACAGCCCAGTCAGCTGCAGAACGGTCTCTTCAGCTAGCTGACAGCAGAGCTGCAGGGCTTCATGTGAGGATTGAGGAGCTAACAAAGCAGTTGGAGGAAACAGATCGCAGAGAGAAAAACCGCAGACACAAGGCGAGGCGCATATGTTGGCCATGGAAATTTTTCTTCAATGCGGCTAATCCTACAACGATGTACATGCTACCAGAAATGCAAGCATTGTTTCATAGAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122485.p1 GENE.S_Transcript_122485~~S_Transcript_122485.p1 ORF type:5prime_partial len:158 (+),score=40.64 S_Transcript_122485:2-475(+)
QKRIQSENVEQLLVEIKATEEDVERWREACELEVEAGKRTVAERNKVIAILQKELEKTKVALKASDSKLKLKEDLAVAAMTAQSAAERSLQLADSRAAGLHVRIEELTKQLEETDRREKNRRHKARRICWPWKFFFNAANPTTMYMLPEMQALFHRV*

Click here to download the sequence:
Link to NCBI Protein BLAST