Transcript Information: S_Transcript_122496.p2


Annotated TAIR IDAT3G08505.2
Annotated Gene Namezinc finger (CCCH-type/C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2580603-2582043 | Reverse length=323
E-Value2.1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7121529921203
Replicate 21.9673825083134
Replicate 33.4066200409198
Condition 2: 8 Hour
Replicate 11.7657966504632
Replicate 21.7099502145014
Replicate 32.9869340592967
Condition 3: 24 Hour
Replicate 13.061066476389
Replicate 23.6088871936859
Replicate 32.2490995010932


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122496.p2 GENE.S_Transcript_122496~~S_Transcript_122496.p2 ORF type:3prime_partial len:157 (+),score=32.20 S_Transcript_122496:1050-1517(+)
ATGGCCAAACTTAAATCCATTGATTGCAAGTATTTTGATTTTGGCAATGGTTCATGCCCTTTTGGACCTAGTTGCTTTTACAAGCACGCGGTGAAGCCAGGCTTATGTTGGAAAAGGTGTATGAACCCAAAAATGTACAGAAAACCATACATATATCGTCGCCATAAGGGCTTAAGGGAGCAAATGGACGATGTCAATGATGAAGATTTATTATCTGAACATCTTGCAACATGGATGCTTAATGGACTAGAGGAAAACTACGCTAATGCTTATGATGAAGAAGATTTTCTTATTCCCTGGGAGAGTGCTTTCATGTGTTTGCAGCCTCCATATGCTGAGGACGATGATGATGATGTACCCTTCAATCATGCTTATCGTGATGGCCGTCTTGAGGAAGTGGCTTTATGTCATCTTGGGGCTTCTGATGGACAGACTATTATTGTTAAAAATATTAGGCTTTCAGACTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122496.p2 GENE.S_Transcript_122496~~S_Transcript_122496.p2 ORF type:3prime_partial len:157 (+),score=32.20 S_Transcript_122496:1050-1517(+)
MAKLKSIDCKYFDFGNGSCPFGPSCFYKHAVKPGLCWKRCMNPKMYRKPYIYRRHKGLREQMDDVNDEDLLSEHLATWMLNGLEENYANAYDEEDFLIPWESAFMCLQPPYAEDDDDDVPFNHAYRDGRLEEVALCHLGASDGQTIIVKNIRLSDF

Click here to download the sequence:
Link to NCBI Protein BLAST