Transcript Information: S_Transcript_122503.p1


Annotated TAIR IDAT5G62940.1
Annotated Gene NameDof-type zinc finger DNA-binding family protein
Annotated Gene Symbol(s)HCA2, DOF5.6
Annotation TypeOrtholog
Chromosome Positionchr5:25257183-25258504 | Reverse length=372
E-Value5.1E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6550794239755
Replicate 23.3494664014709
Replicate 32.7390202104357
Condition 2: 8 Hour
Replicate 14.5043728722657
Replicate 24.8730759413266
Replicate 34.8541039100453
Condition 3: 24 Hour
Replicate 12.8838130020586
Replicate 25.4602582345655
Replicate 36.8257677928037


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122503.p1 GENE.S_Transcript_122503~~S_Transcript_122503.p1 ORF type:5prime_partial len:303 (+),score=65.69,zf-Dof|PF02701.11|2.8e-32 S_Transcript_122503:1-909(+)
CTCAAATGCCCTAGATGTGATTCCACTCACACCAAATTTTGCTACTACAACAACTACAGTCTATCTCAACCAAGGTACTTTTGCAAGACTTGTAGGAGGTATTGGACCAAAGGAGGCACCCTTAGGAACATCCCTGTTGGTGGAGGATGTCGAAAGAACAAGAAATCGAGCTCAAAAAAATCAAATGATCATAACCAACACCAATCCTCGAACCACCACCCAGGTGGGGGTGGTGGTGGTTCGAGCATTATTGGAACATCCTCAGGCAATAACCCAACAGATCGTCACCTCTCTTTTCCTGAAGTTCAACTCCCCCCTCACCTTGCAAACCTAATTGGTGCACAAATGAGCCTTAATGGAGGAGGGGCTAATTTCATGGAGACTAGTAGTCTCATTAGGCCTATTGATTTCATGGAGAGCAAGTATGAAGCATTGGTGGGAGGAGGAAATTTAAGTAGAGGGCATCATGATTTTCTAGGGACTAATACTAATGGAGGTGTTCAATTTGGTGGTATTTTGGGTAGTAATGGATCAATTGGAGATCATCATGGTGGTAATTATGATGGAATTTCCACTACCACAACCAATGGTTTTGGTAATATTTGTTCTTCTTCTCCATTTGGGGTGTCTAGCAATGTTGATATTCATCATGATGGGAACTTAGGAATTAGCTTCATGGATCAAAGATTATTGCTCCCATATGATGGGAATAATGACCATCATCATCAAAGTGGGATGGATGATGTAAAGCCTAACCCTAAGCTTTTGTCCCTTGAATGGCAAGACCAAGCTGTTGGCAATGCAAGCAAGGACTCATCATTTGGGTACAATCATGTCAATGCCACTCTTAGCTCTTGGAGTGGAATGATGGGTGGTTTTCAGCCATCCACCACAAACTCTTTGTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122503.p1 GENE.S_Transcript_122503~~S_Transcript_122503.p1 ORF type:5prime_partial len:303 (+),score=65.69,zf-Dof|PF02701.11|2.8e-32 S_Transcript_122503:1-909(+)
LKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKSSSKKSNDHNQHQSSNHHPGGGGGGSSIIGTSSGNNPTDRHLSFPEVQLPPHLANLIGAQMSLNGGGANFMETSSLIRPIDFMESKYEALVGGGNLSRGHHDFLGTNTNGGVQFGGILGSNGSIGDHHGGNYDGISTTTTNGFGNICSSSPFGVSSNVDIHHDGNLGISFMDQRLLLPYDGNNDHHHQSGMDDVKPNPKLLSLEWQDQAVGNASKDSSFGYNHVNATLSSWSGMMGGFQPSTTNSLF*

Click here to download the sequence:
Link to NCBI Protein BLAST