Transcript Information: S_Transcript_122552.p1


Annotated TAIR IDAT5G39830.1
Annotated Gene NameTrypsin family protein with PDZ domain
Annotated Gene Symbol(s)DEGP8, DEG8
Annotation TypeHomolog
Chromosome Positionchr5:15942883-15945676 | Forward length=448
E-Value1E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.699000960696
Replicate 230.191185710283
Replicate 330.52218895707
Condition 2: 8 Hour
Replicate 127.560884561909
Replicate 228.390006753337
Replicate 328.670438299098
Condition 3: 24 Hour
Replicate 127.21029347074
Replicate 233.266764360604
Replicate 333.776889875857


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122552.p1 GENE.S_Transcript_122552~~S_Transcript_122552.p1 ORF type:3prime_partial len:171 (+),score=33.09 S_Transcript_122552:186-695(+)
ATGCAAGCACTAGTACTTTTATCAGCTTCTCCACCGAGCTGCAACCATGTCAGCAAGTCTCTCAGCCGTCGTGAGCTCTTCTTCGACGGAGTCTCTTCTGTTTACTCTCACTCCTCTAATTCTCCCTCTTCTTCTCGTCCCCAAAGAATTGATTGTTGTGGAAAAGAGAATTTGGTTGAATTAGTACGAAGGAACTTCTGTTTTGTAACTGAACGTCGTGCATTGCTTTTGAGTTTAGGGTTTTCTGCTTGTTCTGTTCTTTCTACCAATCTTCCAGCGCATGCATTAGGAGATCCATCTGTGACAATTGAACAAGTAACACCTCAAGTTTTTCCTTCTGGGGCTCTCTTACCTTCGGAGGAAAGAGTTGTACAATTATTTGAGAAGAATACTTACTCGGTTGTCAACATTTTTGATGTGACATTGCGTCCCCAGCTTAATATTACAGGTGCAGTTGAGATTCCTGAAGGAAATGGTTCTGGAGTAGTCTGGGATGATCAAGGGCACATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122552.p1 GENE.S_Transcript_122552~~S_Transcript_122552.p1 ORF type:3prime_partial len:171 (+),score=33.09 S_Transcript_122552:186-695(+)
MQALVLLSASPPSCNHVSKSLSRRELFFDGVSSVYSHSSNSPSSSRPQRIDCCGKENLVELVRRNFCFVTERRALLLSLGFSACSVLSTNLPAHALGDPSVTIEQVTPQVFPSGALLPSEERVVQLFEKNTYSVVNIFDVTLRPQLNITGAVEIPEGNGSGVVWDDQGHI

Click here to download the sequence:
Link to NCBI Protein BLAST