Transcript Information: S_Transcript_122676.p1


Annotated TAIR IDAT3G47180.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17372821-17373453 | Reverse length=210
E-Value2.6E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9265083789611
Replicate 21.8084253735668
Replicate 30.90701980739019
Condition 2: 8 Hour
Replicate 12.7967725006076
Replicate 22.6895118583278
Replicate 33.9603214129474
Condition 3: 24 Hour
Replicate 12.6261608567927
Replicate 21.733843508573
Replicate 32.2052060682069


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122676.p1 GENE.S_Transcript_122676~~S_Transcript_122676.p1 ORF type:5prime_partial len:183 (+),score=50.35,zf-RING_2|PF13639.2|1.9e-11,zf-rbx1|PF12678.3|1.4e-09,zf-RING_11|PF17123.1|6.2e-06,zf-RING_11|PF17123.1|25,zf-RING_5|PF14634.2|9.3e-06 S_Transcript_122676:3-551(+)
CAAGAACAGGAAAGTGCTTATACAATGCTTGAGAGCATTGAAAGTGATATGGAGGATGAATATGACGAGGAAGATGAAGACGAAGAGGTAGTTGGAAGCTCCTCATCTTATGGCTATGATGGTAACTTTGAGAGCCAGGAATTTGAAGCTGAGCTAGAATTTATCGAGGATGATGGAGAAGGTAGCTACAGTGATGAGATTGAAGAAGATGACATTGATCCAGATGAGATGTCCTATGAAGAGCTGATAGCGTTGGGAGAGATTGTTGGAGAGGAGAATCGAGGACTATCCGTTGAAGAAATATCATCATCTTTATCACCCTATGTCTACAAAAATGTTCATCGCAAATCTGTAATTGATCGTTGTGTGGTATGTCAAATAGAGTATGAAGAAGGGGAACAACTAGCTGCACTAAAGTGTGAACATCCATTTCACACTGAATGTATAAATCAGTGGCTTCAGATTAAGAAGGTCTGTCCGATATGTTCGATGGAAGTGACACCACGAAGCAATCTCGAATTCTTGAAATCTGAGAAGATTGACACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122676.p1 GENE.S_Transcript_122676~~S_Transcript_122676.p1 ORF type:5prime_partial len:183 (+),score=50.35,zf-RING_2|PF13639.2|1.9e-11,zf-rbx1|PF12678.3|1.4e-09,zf-RING_11|PF17123.1|6.2e-06,zf-RING_11|PF17123.1|25,zf-RING_5|PF14634.2|9.3e-06 S_Transcript_122676:3-551(+)
QEQESAYTMLESIESDMEDEYDEEDEDEEVVGSSSSYGYDGNFESQEFEAELEFIEDDGEGSYSDEIEEDDIDPDEMSYEELIALGEIVGEENRGLSVEEISSSLSPYVYKNVHRKSVIDRCVVCQIEYEEGEQLAALKCEHPFHTECINQWLQIKKVCPICSMEVTPRSNLEFLKSEKIDT*

Click here to download the sequence:
Link to NCBI Protein BLAST