Transcript Information: S_Transcript_122805.p1


Annotated TAIR IDAT1G10910.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3639908-3643974 | Forward length=664
E-Value2.3E-242
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5887228938349
Replicate 25.5156973893787
Replicate 34.5827404813795
Condition 2: 8 Hour
Replicate 115.444752381196
Replicate 215.558603826719
Replicate 316.116072658918
Condition 3: 24 Hour
Replicate 13.2767325235891
Replicate 24.6357796406165
Replicate 35.6940676005489


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122805.p1 GENE.S_Transcript_122805~~S_Transcript_122805.p1 ORF type:complete len:660 (+),score=103.96,PPR_2|PF13041.2|0.073,PPR_2|PF13041.2|1.3e+02,PPR_2|PF13041.2|3.7e-15,PPR_2|PF13041.2|2.1e-08,PPR_2|PF13041.2|4.7e-06,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|0.46,PPR_2|PF13041.2|3.9e+02,PPR_2|PF13041.2|1e+04,PPR_2|PF13041.2|1.4e+03,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|3.4e+03,PPR|PF01535.16|4.9e-06,PPR|PF01535.16|1,PPR|PF01535.16|0.00012,PPR|PF01535.16|2e-05,PPR|PF01535.16|0.87,PPR|PF01535.16|0.00015,PPR|PF01535.16|0.00052,PPR|PF01535.16|0.0014,PPR|PF01535.16|4,PPR|PF01535.16|6e+03,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|20,PPR_3|PF13812.2|8.3e-05,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|0.00099,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|0.54,PPR_3|PF13812.2|4.8,PPR_3|PF13812.2|0.29,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|6.2e+03,PPR_1|PF12854.3|0.031,PPR_1|PF12854.3|0.0029,PPR_1|PF12854.3|72,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|22,PPR_1|PF12854.3|0.028,PPR_1|PF12854.3|4.2e-05,PPR_1|PF12854.3|0.32,PPR_1|PF12854.3|0.021 S_Transcript_122805:154-2133(+)
ATGGAGGGTGGTGGTGCACTGTTGATGAGCAACAATAGCATCAATGGCTATCCCCAAATCGTCATAATCAATGCATTCTCGACAACCCAAACTCGGTTAAGTCTTTACCCTCTCACCATGCCTAAAGCAACCAATTCCGTAAGCGCTTCCGCTAAACCTCACAATAGATCTGCTTCCAATAAAGGCTCTTCCTTAAAAACAGCTCGAAAGCCTCATCTTTTATCTGCGTCAGCACCAAGAGAGGCTGCTCTTACTGACATTCAAACGTCCTCTGACTTGGGCTCTGCTCTAGCCAGGTCTGGAGTAATATTGAAGGCATCAGAGTTTAACCTCATATTACGGAATTTCGGGAGGTCAAGGAGGTGGAAGGAAATTTCTCAGCTATTTGAATGGATGCAGAATCATGAGAAGACCAATGTGGCATCGTATAGCAGCTACATAAAATTCATGGCAGAGAGCAGGAATACTTCAAGGGCTCTTAGTACATATGAGCATATACATGGGGCTATGAGGAATAATGTCTCCATCTGCAATGCTATTCTGAGTTGTTTGGTTAAGAATAACAATTTTGACAAAGCAATCAATTTGTTCAAGCAGATGAAGCAATGCGGTTTACAGCCAGATGTGGTAACATATAGCACGTTGCTTGCAGGTTGCATAAAAGCAGGCAACGGATATAGGAAGGCATTAGTGCTGGTTAAAGAGCTGGAAGCATCTGGGATTTTGATGGACAGTGTGATGTATGGAACCCTCATAGCTGTTTGTGCTTCAAACTGTCAATGTGAGGAGGCAGAGATGTATTTTATCCGTATGAAGGATGAAGGTCATTCCCCTAATCTCTATCATTACAGCTCACTACTCAATGCTTACTCTGTCAGTGGGAACTATCAGAAGGCTGATGAGTTGTTTCAAGGCATGAAAGCTGCAGGGTTGGTGCCGAATGAGGTTGTGTTGACAACTTTGTTAAAAGTCTATGTTAGAGGGGGCTTCTTTGAGAAGTCTAGGCTACTGTTATCTGAGCTGGAAGCCTTGGGCTATGCTGGGGATGAGATGCCTTACTGTCTCTTGATGGATGGTCTCTCGAAATATGGGAAGATAGATGAAGCTAAATTAGTTTTTGACGAGATGAACAAGAGACAAGTCAGATCCGATGGCTATTCACACAGTATTATGATATCAGCATTCTGTAGAGCTGGGCTAGTGGAGGAAGCAAAGAAACTGGCTAGGGATTACGAAGCTATGCATAGTAGATATGACTTGGTCATTTTAAACGTCATGTTATGTGCTTACTGTGGAGCAGGCGACATGGAATGTGTGATGCAAATATTGAGTAAAATGGATAAACTGGGTATAAATCCTGATCAGATTACCTTCCGTACTCTAGTAAAATATTTCTGTAAGGAGAAATTATATCTGCTTGCATATCGTACCATGCAGGACATGCATGCCAAAGGGTATGAACTTGAGGAGGAAATACTATCCTCCTTATTTCTTCATCTTGTTAGAGTTGATGCACACTCTGAGGCATTTTCTGTGTACAATATATTGCGATCTGGTGGAGCAGCTATGTGCGGGACCTTTCATGAGAAGATATTACACATTCTATTGGCAGAAAAGCTCTTGAAAGATGCATATGTGGTGGTCAAGGAAAATGCAAAACTGATTTCTGCACAAGCTGCTAAAAGATTTTTGACTGCATTTACGGAATCTGGCGACTTATCCTCAATAAATGATGCTCTGGAAACTATTCATACTTCAGGCTACAAGATTCATCAGGATGTATTCTACCTGGCCATTTCACGTTATATTGTGCAACCTGAAAAGAAGGAACTGCTGTTCCAGTTACTTCAGTGGATGTCCAGTCATGGTTATGTGGTTGATTCATCCGCAAGAAATCTCATTCTCAAGAAATCGAACTTATATGGGCACCAGTTCATAGCTGACATATTATCAAAACAACCTTCTGTATCAAGTACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122805.p1 GENE.S_Transcript_122805~~S_Transcript_122805.p1 ORF type:complete len:660 (+),score=103.96,PPR_2|PF13041.2|0.073,PPR_2|PF13041.2|1.3e+02,PPR_2|PF13041.2|3.7e-15,PPR_2|PF13041.2|2.1e-08,PPR_2|PF13041.2|4.7e-06,PPR_2|PF13041.2|2e-10,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|0.46,PPR_2|PF13041.2|3.9e+02,PPR_2|PF13041.2|1e+04,PPR_2|PF13041.2|1.4e+03,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|3.4e+03,PPR|PF01535.16|4.9e-06,PPR|PF01535.16|1,PPR|PF01535.16|0.00012,PPR|PF01535.16|2e-05,PPR|PF01535.16|0.87,PPR|PF01535.16|0.00015,PPR|PF01535.16|0.00052,PPR|PF01535.16|0.0014,PPR|PF01535.16|4,PPR|PF01535.16|6e+03,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|20,PPR_3|PF13812.2|8.3e-05,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|2.5,PPR_3|PF13812.2|0.00099,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|0.54,PPR_3|PF13812.2|4.8,PPR_3|PF13812.2|0.29,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|6.2e+03,PPR_1|PF12854.3|0.031,PPR_1|PF12854.3|0.0029,PPR_1|PF12854.3|72,PPR_1|PF12854.3|0.029,PPR_1|PF12854.3|22,PPR_1|PF12854.3|0.028,PPR_1|PF12854.3|4.2e-05,PPR_1|PF12854.3|0.32,PPR_1|PF12854.3|0.021 S_Transcript_122805:154-2133(+)
MEGGGALLMSNNSINGYPQIVIINAFSTTQTRLSLYPLTMPKATNSVSASAKPHNRSASNKGSSLKTARKPHLLSASAPREAALTDIQTSSDLGSALARSGVILKASEFNLILRNFGRSRRWKEISQLFEWMQNHEKTNVASYSSYIKFMAESRNTSRALSTYEHIHGAMRNNVSICNAILSCLVKNNNFDKAINLFKQMKQCGLQPDVVTYSTLLAGCIKAGNGYRKALVLVKELEASGILMDSVMYGTLIAVCASNCQCEEAEMYFIRMKDEGHSPNLYHYSSLLNAYSVSGNYQKADELFQGMKAAGLVPNEVVLTTLLKVYVRGGFFEKSRLLLSELEALGYAGDEMPYCLLMDGLSKYGKIDEAKLVFDEMNKRQVRSDGYSHSIMISAFCRAGLVEEAKKLARDYEAMHSRYDLVILNVMLCAYCGAGDMECVMQILSKMDKLGINPDQITFRTLVKYFCKEKLYLLAYRTMQDMHAKGYELEEEILSSLFLHLVRVDAHSEAFSVYNILRSGGAAMCGTFHEKILHILLAEKLLKDAYVVVKENAKLISAQAAKRFLTAFTESGDLSSINDALETIHTSGYKIHQDVFYLAISRYIVQPEKKELLFQLLQWMSSHGYVVDSSARNLILKKSNLYGHQFIADILSKQPSVSST*

Click here to download the sequence:
Link to NCBI Protein BLAST