Transcript Information: S_Transcript_122832.p1


Annotated TAIR IDAT5G40820.1
Annotated Gene NameAtaxia telangiectasia-mutated and RAD3-related
Annotated Gene Symbol(s)ATRAD3, ATR, ATATR
Annotation TypeOrtholog
Chromosome Positionchr5:16343860-16353847 | Reverse length=2702
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.75472387027521
Replicate 20.55119730832414
Replicate 30.8467967951957
Condition 2: 8 Hour
Replicate 10.69116727563969
Replicate 20.96677806410703
Replicate 30.69085799124855
Condition 3: 24 Hour
Replicate 10.67850414623047
Replicate 20.67333403737967
Replicate 30.83449032805583


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122832.p1 GENE.S_Transcript_122832~~S_Transcript_122832.p1 ORF type:complete len:1481 (-),score=329.12,FAT|PF02259.19|6.7e-51,UME|PF08064.9|7.7e+02,UME|PF08064.9|1.3e-14 S_Transcript_122832:2945-7387(-)
ATGTCATGCTTGTACGGGTTTTGCCATGAATATGATGCAGATGTTACAAACGCTTATGACTATACAATATCCATTTATAGTGGTGAAAAGCAAAATGTGATGCTTGACTCTTTATTGGAAGGCTTTTCGTGTCCTAAGTGTGACCAAAGTGCTGATGTGTGTGATGCTTGGCATTATGCTGCTGACACAAGAGGCCTGAACACCGGTGGTTGCAACTTTATTCACATACAGTCGTTGTTCTTCAATCTTCTTAATGATGAATCCTCAGAAGAGGTCCAAATTGCCTGCATTGAGGTACTTCATCGAATCATTGTACACGTTGGGAGGGATGTTCTGCTGAAAACTAGATCTGAGTGGATCAAATGTATTGAAGTGTTACTCCTTCACAGAAAGAGGTCTTTGAGGGAAGCATTCTGCACCCAGATTAGGTTTTTCTTGAAAGAATCTATCTTGAGTTTCTTATTTCCAGAGAGTGAGATATTGAATGCAAGTAAAGAGCGTATGTTCCTTGACAAGATAAAAGTAGCTCTTGCAGCAACTGAAGATCCCCAAGTTATTGTGACTTTGTTGGAGTCTGCAGCAGAGATTATGATGGCCGTTGATATAAAGTATCCGCTTTTCCTATCGTCTCTTATTCTACTAGTTGATAGGCTTGATGATCCTCATCTGACAGTGACAGTAACTGCTGCAAGGTTAATTAATAGGTCTTGCTATTTCCATCTGAGAGGAGGGATTAGGCTGGTCCTTTCAAAGGTTGCAAATATTCGAAACGAGCTATTTGAGTATCTCTGCCCAAAAGTTGTAAGTCATCCTAAAGTGGTGAGGGAGTTTGCAGAAGCTGTTCTTGGCATTGAAACAAAAGAACTTGTTCTTGAAATGATACCAGTTGTCCTGCCAAAGCTTGTTGTCTCTCAGAAGCATGATGATCAATCAGTTGCTATTTTGGAAGAGTTGGCCAGGTGGTTGGAAATAGACATGGTGAAGCTGATTGTTGATTGGGTACCAAAAGTTCTCGCTTATACTCTTCGTCGAGCTGATGAAAAAGAGTTGTTTTCAGCTCTGCAGTTTTACCTTACGAGCACAGGATCTGACAAGCAAGAGATATTTGCTGCTGCATTACCTCAGATGATAGAAGAAGTTGCCAAAATTCTGATAGGAAGTGAAGATCTTTCTGGCCTTTTGAATCGTCATTTTGTTCGACTTCTTGACAGCATTGATCGGAAGATGCTTCATGCAGAGGATGTTTCTTTGCAGAAGCAAGCAATTCAACGAATCAAAATGTTGATAAATATGATGGGACAGCACCTTAGCACCTATGTGCCCAAACTGATGGTGCTTCTCATGCATGCAGTTGACAAGGAGGCACTGCGCAGTGAGGGTCTCTCTGTGCTACATTTATTCATCAAAGAGCTGGCAAAGTCATCACCATCTAGTGCTAAGCATGTAATATTTCAAATTTTTGCTGCTCTTATTCCATTTTTAGAGAAGGAACAAGATCAACCTTCATTGCATTTGGATAAGATTGTTAATATCTTAGAAGAGCTTGTTTATGAGAACAAGACAATACTGAAGCAGCATATCCGTGAGTTTCCTCTATTGCCCAGCACTCCAGCATTGGTAAAGGTGAACCAAGTAATACAAGAAGCAAGGGGGTCCATGACATTTAAGGATCAATTGCGAGATGCTGCTGATGGCTTGAATCATGAGAACTTGAATGTGAGGTACATGGTCGTTTGTGAGCTCAGCAAACTACTTAACCTCAGAAAGGAGGATTTGGCAGCAGTGATTAACAATGAAACTGATGTAGATATCACTGTTTTAAGCTCGTTGATTACATCCTTATTAAGGGGATGTGCAGAAGAATCAAGGACTTCAGTTGGTCAAAGGCTTAAGATGGTATGCTCTGATTGTTTAGGAGCTTTAGGTGCAATAGATCCTGCCAAGGTAAAGGGATCGTCATGTCAAAGGTTCAAAATTCAGTGCTCAGATGATGATTTAATTTTTGAACTAATACATAAGCACCTCGCCAGGGCATTCAGAGCTGCACCAGATACCAGTATCCAAGACTCTGCTGCACTGGCTATACAAGATTTGCTAGAAACTGCAGGCTGTAAAGCATATTTGGACGAGGATGCAGTTGGGTCCAAGGGCTCAAATGACTGTCAAGTGATAAGGGGTCAACGGTTGTGGGACCGTTTCTCTAATTATGTTAAGGAGATCATAGCACCATGCTTAAATTCTCGATTTCGACTTCAGAATGTGGCAGATTCTACATCTTCTGGGCCTATATATCGCCCATCCTTGTCCTTCAGAAGGTGGATCTCTCTTTGGATTAAAAAACTGATTGGGCATGCTACGGGAACTCGTGCAAGCATCTTCAATGCTTGTCGTGGTATTGTGCGTCATGATATGCAGACAGCAATATATCTGCTACCGTATTTAGTGCTTGATGTTGTTTGCCATGGAGCAGAGGCGGCACGATATGGTGTAACAGAGGAGATATTGTCTGTCCTCAATGCAGCTGCCTCAGAAAACAGTGGTGCAGCAGTTCATGCAATTGGTGGTGGGCAAAGTGAGGTCTGTATTCAGGCTGTATTTACCTTGCTTGATAATATGGGACAATGGGTTGATGATGTGGAACAGGAGATAGCACTTTCTCTTTCATCATTGTCGTCTAAACAGCCTTCCAAGTTTAGTAAAACAACTACAAACTCATCAACCGGTTCCGACCAACTCCTCACACAATGCAAATATGTTTCTGAGCTTTTGGATGCAATTCCAAAGGTGACATTAGCGAGGGCTTCATTTAGATGTCAGGCTTATGCTAGATCTTTGATGTACTTTGAGTCACATGTACGGGGAAAATCAGGTTCATTTAACCCAGCAGCTGAGAAGAGTGGCATCTTTGACGATGAAGACATCTCGTTCCTGATGGAAATATATAGTGGTCTGGATGAGCCGGATGGTTTATCAGGGTTGGCAAACTTACGGAAGTCAGTGAGCTTGCACGACCAGCTTTTAATAAATAAGAAAGCTGGAAACTGGGCAGAGGTCTTGACTTCCTGCGAGCAGGCCTTGCAGATGGAGCCCATGTCTGTTCAGAGACATTCGGATGTTCTTAACTGCTTACTTAATATGTGCCATTTACAGGCGACAGTCACTCATGTTGATGGACTAATATCAAGGATTCCTCAATACAGGAAAACATGGTGCATGCAAGGAGTGCAGGCAGCGTGGAGGCTTGGCAGGTGGGACTTGATGGATGAGTACCTCAAAGGAGCTGACAAAGAAGGCTTGTTATGCAGCAGTTCTGAGAGTAACGCTTCATTTGAATTGGATGTCGCTAAGATCCTTCAGTCAATCATGAAAAAGGATCAGTTTGCAGTTGCTGAGAAAATTGCATTGTCAAAGCAAGCTCTAATTGCTCCACTAGCTGCTGCGGGCATGGACTCTTATACACGGGCTTATCCTTTTGTAGTAAAGCTTCAGCTATTGAAAGAGCTGGAAGAATTTCATGATCTACTTGTGGGTGAATCATTCTTGGAAAAACCTTTTAATCTTGGAGATCCAATATTCAAGAAAGCTTTAGGGAATTGGGAAAACCGGCTGAGATATACGCAGCCGTCCCTTTGGGCGAGGGAGCCACTCTTAGCTTTCAGGAGACTTGTTTTTCATGCCAGTGGTCTGGGTGCGCAAGTTGGAGAATGCTGGCTTGAATATGCAAAACTCTGTCGCTCTGCTGGTCATTACGAGACTGCTAATCGAGCAATTCTTGAGGCAAAATCATCTGGTGCACCTAATGTCCACATTGAAAAGGCCAAGCTTCTGTGGAGCATGAAGCGATCTGAGGGTGCAATTGCTGAATTGCAGCAGTCTCTCTTAAACATGCCGCTGGAGGTTGTTGGATCTGCTGCAATATCATCTATTACTAGCCTTTCTTTGGTTCCACTGAATCCACAACCCATTCATCGTGATACTCAAGCTCTAAATGAAGATCTCAATATTGCAAAAACTCTACTTTTGTACTCAAGGTGGATCCATTATACAGGGCAGAAGCAGAAAGAAGATGTGATGAGTCTTTACTCTAGGGTGAGGGAATTGCAACCTAAGTGGGAGAAAGGGTACTTTTATGTTGCTAAATATTGTGATGAGGTACTAGCAGATGCTAGAAAACGTCAGGTGGAGCACATTGATACTAATCCAAAGATACCACCTGCTGTTGGTGCTGTCTCTAGTAATTTGACTAGTGAGAAGCCTTGGTGGGTTTATCTTCCTGAGGTTCTGTTATTTTATGCTAAAGGCCTTCACAGGGGTCACAAGAATCTTTTTCAAGCACTTCCAAGATTGTTGACCCTCTGGTTCGACTTTGGATGCGTATATCAGCAATGTGGTTCATCATTGAATAAAGATCTGAAGAGTGTCCACGTGAAGGTAGTATTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122832.p1 GENE.S_Transcript_122832~~S_Transcript_122832.p1 ORF type:complete len:1481 (-),score=329.12,FAT|PF02259.19|6.7e-51,UME|PF08064.9|7.7e+02,UME|PF08064.9|1.3e-14 S_Transcript_122832:2945-7387(-)
MSCLYGFCHEYDADVTNAYDYTISIYSGEKQNVMLDSLLEGFSCPKCDQSADVCDAWHYAADTRGLNTGGCNFIHIQSLFFNLLNDESSEEVQIACIEVLHRIIVHVGRDVLLKTRSEWIKCIEVLLLHRKRSLREAFCTQIRFFLKESILSFLFPESEILNASKERMFLDKIKVALAATEDPQVIVTLLESAAEIMMAVDIKYPLFLSSLILLVDRLDDPHLTVTVTAARLINRSCYFHLRGGIRLVLSKVANIRNELFEYLCPKVVSHPKVVREFAEAVLGIETKELVLEMIPVVLPKLVVSQKHDDQSVAILEELARWLEIDMVKLIVDWVPKVLAYTLRRADEKELFSALQFYLTSTGSDKQEIFAAALPQMIEEVAKILIGSEDLSGLLNRHFVRLLDSIDRKMLHAEDVSLQKQAIQRIKMLINMMGQHLSTYVPKLMVLLMHAVDKEALRSEGLSVLHLFIKELAKSSPSSAKHVIFQIFAALIPFLEKEQDQPSLHLDKIVNILEELVYENKTILKQHIREFPLLPSTPALVKVNQVIQEARGSMTFKDQLRDAADGLNHENLNVRYMVVCELSKLLNLRKEDLAAVINNETDVDITVLSSLITSLLRGCAEESRTSVGQRLKMVCSDCLGALGAIDPAKVKGSSCQRFKIQCSDDDLIFELIHKHLARAFRAAPDTSIQDSAALAIQDLLETAGCKAYLDEDAVGSKGSNDCQVIRGQRLWDRFSNYVKEIIAPCLNSRFRLQNVADSTSSGPIYRPSLSFRRWISLWIKKLIGHATGTRASIFNACRGIVRHDMQTAIYLLPYLVLDVVCHGAEAARYGVTEEILSVLNAAASENSGAAVHAIGGGQSEVCIQAVFTLLDNMGQWVDDVEQEIALSLSSLSSKQPSKFSKTTTNSSTGSDQLLTQCKYVSELLDAIPKVTLARASFRCQAYARSLMYFESHVRGKSGSFNPAAEKSGIFDDEDISFLMEIYSGLDEPDGLSGLANLRKSVSLHDQLLINKKAGNWAEVLTSCEQALQMEPMSVQRHSDVLNCLLNMCHLQATVTHVDGLISRIPQYRKTWCMQGVQAAWRLGRWDLMDEYLKGADKEGLLCSSSESNASFELDVAKILQSIMKKDQFAVAEKIALSKQALIAPLAAAGMDSYTRAYPFVVKLQLLKELEEFHDLLVGESFLEKPFNLGDPIFKKALGNWENRLRYTQPSLWAREPLLAFRRLVFHASGLGAQVGECWLEYAKLCRSAGHYETANRAILEAKSSGAPNVHIEKAKLLWSMKRSEGAIAELQQSLLNMPLEVVGSAAISSITSLSLVPLNPQPIHRDTQALNEDLNIAKTLLLYSRWIHYTGQKQKEDVMSLYSRVRELQPKWEKGYFYVAKYCDEVLADARKRQVEHIDTNPKIPPAVGAVSSNLTSEKPWWVYLPEVLLFYAKGLHRGHKNLFQALPRLLTLWFDFGCVYQQCGSSLNKDLKSVHVKVVF*

Click here to download the sequence:
Link to NCBI Protein BLAST