Transcript Information: S_Transcript_122977.p1


Annotated TAIR IDAT1G20720.1
Annotated Gene NameRAD3-like DNA-binding helicase protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7185658-7192794 | Reverse length=1175
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0323977503034
Replicate 22.689726535697
Replicate 31.9985753843583
Condition 2: 8 Hour
Replicate 13.8742541771365
Replicate 24.4921959021602
Replicate 34.2971389992512
Condition 3: 24 Hour
Replicate 11.949503546571
Replicate 21.9503519125462
Replicate 32.3312805984012


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_122977.p1 GENE.S_Transcript_122977~~S_Transcript_122977.p1 ORF type:complete len:1255 (+),score=244.36,Helicase_C_2|PF13307.2|2e-60,DEAD_2|PF06733.11|3.9e-42 S_Transcript_122977:245-4009(+)
ATGAAGAAATCCGAAAACCCTAAAAATGTGTTCCACATTGGGGGAATCAGATTGGAGTTTCCGTACAAACCCTATGGAACTCAAATGGCGTTCATGTCTAGGGTAATCTCAACCCTAGATCGAGCTCAAAGGGACGGCCATTGCCACGCTTTGCTCGAGTCTCCGACCGGCACCGGCAAGTCTCTCTCTCTCCTCTGCTCTGCCATTGCCTGGCAGCAGCAACGTGGTCCTAAGTCTGTAAACCCTAACCCTAGTAATCAACCTCAGTCTCGACCCGATTCTAGAGCTTCTTCCGATCCTCTCAATCATGGCGGTGGTTTTGTCGTCGATTCCCAGCTCTCTGAAACTCCTACACCAGAAGCAGCTGCCCCTGCTGTGAATGGCAAAAGTAAAAAACAGAAGCCGGTGCCTACCATATTTTATGCATCGAGAACTCACTCACAGATCTCCCAAGTAATTCGTGAGTACCGAAAGACTACATATAGGATCTCAATGGCCATTTTGGCATCAAGAAAATATTATTGCACAAATGCAACAGTACATTCTGGAGATAATTTGGATGAGGGTTGCAAGTTACTCCTTGAGGACAAGGAAGCTGGATGTCCACAATTCAAGAATGCTCATAGAGTTAGAAATCACCCATCTTTTCAGAGAGGAGGGTGTCATGAGGTACATGATATCGAGGACCTCGTCAAAGTGGGGAAAACAGTAAAAGGTTGCTCATACTTTGCAGCGCGTTCTATGGCTGATGACGCGCAAATAGTTTTTTGCCCATACAGTTATATCATTAACCCAATTGTTAGAAAAGCAATGGAAGTTGATATCAAGGGAGCAATTCTCATTCTTGATGAAGCACATAATATAGAGGACCTGTCTCGAGAAGTGGGAAGTGTGGATGTTGATGAAGATGCCCTGCAAAAATTGCAGACAGAGCTAGGCCAACTCTGTGGAGCTGACGCACTGACTTACCAGCCTCTATATGAGATGGTGCAAGATGTCATAAGCTGGATGGAACGCCGGAAAGATGCTTTAGAAAAGCGTGAGTTTCTGCACTATTTTTCATGTTGGACTGGAGATAAGGCTTTAAGGGAGCTTCAAGAGGCAAACATATCACAACAGTGCTTCCCAATCTTGCAAGAGTGTGCCGCCAAGGCAATTCGAGCTGCATCTGATGCAGAGCAAGGATTACCTCATTTGAGCGGCATGTCGAGATTTATTTTAGAAGGCCTCTTCTCTTCTCTTAGTTACTTTTTCCACGGAAATGGGAGTCACATAAATGATTACCAGCTTGTTATACAACGTTTTGTCAAAAAAGATTCTGTGAATCCTTCAGGTAGCTGGAAACTTACTTTGGGTTTATGGTGCTTGAACCCAGCTGTTGTATTTAGAGATATTGCTGATCTATCATTGTCGGTCATCTTAACATCTGGGACTCTGTCACCAATGACTTCATTTTCATCTGAACTTGGGGTCCCATTTGGTACTTTGTTGGAGGCTCCGCATGTGATTAATGTTGATTCACAGGTCTGGGCCTCTATAATTTCTACTGGTCCATGTGACTATCCGCTAAATGCAAGCTATAAAACAGCTGATGGATATGCCTTTCAGGATGCTGTTGGTAAATCCCTGGAGGAGGTCTTCAAGGTTGTTCCTGGTGGGTCACTTGTCTTCTTTCCGAGCTATAAATTGATGGAGAAACTATGTAAAAGGTGGCGTGAAACAGGTCAATGGTCTCGGCTCAATAGACGGAAAACTCTCTTCATTGAAGCCAGAGGGGGAAGCCAAGAGGATTTTGAGACTGTTTTGAAGGGCTATTACAGTTCAATTCGTCCAGGCAGGAAGCTGTCTCTTGGAAAAAGGCGGAAGGCTAAGAAAGTGGATGTCAATGATTGTACCACAACTGATTCACTTGATACATGTAAGGAGGGCGCCGCCTTTCTTGCAGTTTGCCGCGGGAAGGTGTCGGAAGGAATTGACTTTTCAGATGATAATGCTCGAGCTGTTATAATTGTTGGTATTCCCTTTCCAAATATAAACGATGTCCAAGTTGCAGAAAAGAAGAAATACAATGACACATATAGACTTTCCAAAAATCTCCTGAGTGGGAGTGACTGGTACTGCCAACAAGCTTTTCGAGCATTGAATCAGGCAGCAGGCCGATGTATTCGTCATAAGTCTGACTACGGGGCTGTCATCTTTTTAGATGAGCGCTTTCGCGAGGAAAGAAATACAGCCTACATTTCAAAATGGCTTAGGAAATCAATTAGGACATATGAAAAGTTTGAAACATCAATTGAGGAATTGAGATCTTTCTTTTGTAACGTTAAGGAACAGGTTGGGGATGCTATTATGTTGGAGAGTCCTGTCACTGGTTTAGAGAATATTCCTCCTGATAATTCGAACAAAGGAAGTGTCAAACGGAAAAGCCAGAAGTTCAGCAAATCTGAAGTTGGTCCAAAGAGAACGGTTTTGGACAATATGGTGATGACATCTCCACCTTCTCACTGTCTACCATTTAAACCTCATGGTATTACTGGTTATAGGACAGCAAAATCTCAATGCTATGAGGAAATTCAAGAATCTTCCCCAGTCAATCTGGAAAATTTTGAGAACCAGATAAAGACTACTGAATCTGGTTGCAATTGCAGTGAGGACACAAGGTGCGAAGTGTCATTGGCATCTCCTTTGGATGAAAGTCCAGAACTCTCTGTTGTCAAGGGGACTCCTGTGGCTGGAAGCTGTACTGTAGCTAGTCCTGAAGCATCCATGAATGATGACAACTCTAACTCGACCATAATCCAAACTTTTTGCGAGTTTGGTCAAGTAAATTCTTTGTCCAGTTCCATAGAGGTCACTCCGGAAAGGAATTCCAGAGGAAACGCTGAAGTGTCACTGCCAGAAATAGATTCCACAGTAAATTTGAGTGTTAATTCTCATGCCCAGAAAAAGAGGGCATTGCTTGATTTGTCACTGGTAAACCCCATTCAGGATATGAAATTTGATGTTGGGACTGGAGAAGTAACGGATGACTTCACAGAGATGGACTATACAGTGGCAACTGGCAATTCAATTGCAAGAACCAAACCTGCTCGAAAGACAAATTCCTTAGAATGTGAACCTAAGTATTCTAGAGCAAATGAGGACACTAAATCTCCAAAGTCTTCTGGCCTCTTTCTTGACCAACAATTACAAGTTTTTTGTGCACTCTGCAGAAGTCCACTGGGCCGGCCTGAAAACAATTCATATATCTCATGTTCCTCGACTTCATTATCAAAAGTCATGCTGACTTCTCTTTCTGAAGGAGAAGGGCAACAAGCCAGGCTGACATCACCATCTCTACTGCCTATCCTGATTGTCGATGTTTTATCAGTTGATCAGCGAATTTTTAGTAGGAACAAGGACATTCCAGGACAGGGAATCTGGTCCCAAGATGATGGATGTGTATACAATACCATTTTCTGTCCTTTCTGTGTTTCTCCAAATCAATGTCTTGGAGTGCAGATCCTGGCCACAGATGCTTCAAATCTTCAGCTTATTAACAAGATACTCTTTCTTAGTGACCGGTTAGAAGTTAGGAGTGACCAAAGATTAAAGAGAAAGGATTCTTTGGTGAACAATGGTTCACAAGCCAATGAGATTGTTGATATAAATTCCATCTGTAAATATGCATACCAACCTCAGCAACAGAGTCCAGGAGGCTGGAGAATGACCAAACAAAAGTCAAGAATACTGAAAAGGAGTCCTACTTCACAATTCCAGACCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_122977.p1 GENE.S_Transcript_122977~~S_Transcript_122977.p1 ORF type:complete len:1255 (+),score=244.36,Helicase_C_2|PF13307.2|2e-60,DEAD_2|PF06733.11|3.9e-42 S_Transcript_122977:245-4009(+)
MKKSENPKNVFHIGGIRLEFPYKPYGTQMAFMSRVISTLDRAQRDGHCHALLESPTGTGKSLSLLCSAIAWQQQRGPKSVNPNPSNQPQSRPDSRASSDPLNHGGGFVVDSQLSETPTPEAAAPAVNGKSKKQKPVPTIFYASRTHSQISQVIREYRKTTYRISMAILASRKYYCTNATVHSGDNLDEGCKLLLEDKEAGCPQFKNAHRVRNHPSFQRGGCHEVHDIEDLVKVGKTVKGCSYFAARSMADDAQIVFCPYSYIINPIVRKAMEVDIKGAILILDEAHNIEDLSREVGSVDVDEDALQKLQTELGQLCGADALTYQPLYEMVQDVISWMERRKDALEKREFLHYFSCWTGDKALRELQEANISQQCFPILQECAAKAIRAASDAEQGLPHLSGMSRFILEGLFSSLSYFFHGNGSHINDYQLVIQRFVKKDSVNPSGSWKLTLGLWCLNPAVVFRDIADLSLSVILTSGTLSPMTSFSSELGVPFGTLLEAPHVINVDSQVWASIISTGPCDYPLNASYKTADGYAFQDAVGKSLEEVFKVVPGGSLVFFPSYKLMEKLCKRWRETGQWSRLNRRKTLFIEARGGSQEDFETVLKGYYSSIRPGRKLSLGKRRKAKKVDVNDCTTTDSLDTCKEGAAFLAVCRGKVSEGIDFSDDNARAVIIVGIPFPNINDVQVAEKKKYNDTYRLSKNLLSGSDWYCQQAFRALNQAAGRCIRHKSDYGAVIFLDERFREERNTAYISKWLRKSIRTYEKFETSIEELRSFFCNVKEQVGDAIMLESPVTGLENIPPDNSNKGSVKRKSQKFSKSEVGPKRTVLDNMVMTSPPSHCLPFKPHGITGYRTAKSQCYEEIQESSPVNLENFENQIKTTESGCNCSEDTRCEVSLASPLDESPELSVVKGTPVAGSCTVASPEASMNDDNSNSTIIQTFCEFGQVNSLSSSIEVTPERNSRGNAEVSLPEIDSTVNLSVNSHAQKKRALLDLSLVNPIQDMKFDVGTGEVTDDFTEMDYTVATGNSIARTKPARKTNSLECEPKYSRANEDTKSPKSSGLFLDQQLQVFCALCRSPLGRPENNSYISCSSTSLSKVMLTSLSEGEGQQARLTSPSLLPILIVDVLSVDQRIFSRNKDIPGQGIWSQDDGCVYNTIFCPFCVSPNQCLGVQILATDASNLQLINKILFLSDRLEVRSDQRLKRKDSLVNNGSQANEIVDINSICKYAYQPQQQSPGGWRMTKQKSRILKRSPTSQFQT*

Click here to download the sequence:
Link to NCBI Protein BLAST