Transcript Information: S_Transcript_123159.p1


Annotated TAIR IDAT2G25920.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K Homology domain-containing protein / KH domain-containing protein (TAIR:AT2G25910.2); Has 131 Blast hits to 125 proteins in 54 species: Archae - 0; Bacteria - 50; Metazoa - 12; Fungi - 12; Plants - 41; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11054425-11055916 | Reverse length=280
E-Value7.8E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6962501715528
Replicate 25.4281466371663
Replicate 34.6838694815494
Condition 2: 8 Hour
Replicate 16.5160914857906
Replicate 25.060299097081
Replicate 35.4981352949357
Condition 3: 24 Hour
Replicate 15.2011627358558
Replicate 25.5760171338632
Replicate 33.1027118117405


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_123159.p1 GENE.S_Transcript_123159~~S_Transcript_123159.p1 ORF type:complete len:252 (+),score=53.75 S_Transcript_123159:494-1249(+)
ATGGGGTCGGAGACAAATTCACCAGCACCTTCTCCAAGTGGGAAGAGAAACAGAGATCCTGAAGATGAAGTTTATGTTGATAATCTTCACTCCCATAAGCGCTACCTCAGTGAGATGATGGCATCGAGTTTGAACGGATTAACTGTGGGAGACCCAATTCCGGAAACTATCATGGATTCTCCAGCTAGGTCAGACAGCATGTTTTATCTGAGAGATGAGGTTGCGTTGCAGTATTCACCAATGTCAGAGGACTTGGATGATTCACGCTACTGTGAAACTCCTATGAGTGCTTGTTCATCCCAATCTGAAAGCCGACCTACTAGTCCTGTCTCCCCGTACAGATATAAACCTGGCAGTGGATTCTGTTCCAGCCCTCCCAGCACATCACAGCCTCCAAATGGATGTACTGTCCTCCCTGCTTCTTCACAACCTCGTCAAAGAGGGTCTGATAATGAAGGCAGATTCCCATCTTCTCCGAGTGATATATGCCACTCAGGGGACTTGAGGAAAGCAGCACTATTACGGTCTGTACAGATGAGATCACAGCCTTCAGGCACACCAACTTTTGATTCCTTTACTCCTTGTCAAGAGCCAATGCAGAATGTTGAACCTGAACCACGATCCTGTTCATTTATGAAACCTTTGGACGACGAACGTGAATACCATATTGACAGATGTTCGGCCATGGGTTCTCCGGAGCCTGAATTTGATCAAGGAAAGTCTTGCATGGCAGTACATTTGAGCAAGGAGGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_123159.p1 GENE.S_Transcript_123159~~S_Transcript_123159.p1 ORF type:complete len:252 (+),score=53.75 S_Transcript_123159:494-1249(+)
MGSETNSPAPSPSGKRNRDPEDEVYVDNLHSHKRYLSEMMASSLNGLTVGDPIPETIMDSPARSDSMFYLRDEVALQYSPMSEDLDDSRYCETPMSACSSQSESRPTSPVSPYRYKPGSGFCSSPPSTSQPPNGCTVLPASSQPRQRGSDNEGRFPSSPSDICHSGDLRKAALLRSVQMRSQPSGTPTFDSFTPCQEPMQNVEPEPRSCSFMKPLDDEREYHIDRCSAMGSPEPEFDQGKSCMAVHLSKEE*

Click here to download the sequence:
Link to NCBI Protein BLAST