Transcript Information: S_Transcript_12316.p1


Annotated TAIR IDAT5G23420.1
Annotated Gene Namehigh-mobility group box 6
Annotated Gene Symbol(s)HMGB6
Annotation TypeOrtholog
Chromosome Positionchr5:7888712-7890111 | Reverse length=241
E-Value8.9E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.358945944913
Replicate 216.767720063711
Replicate 311.52671005225
Condition 2: 8 Hour
Replicate 120.365747752862
Replicate 228.747825502049
Replicate 329.948765884999
Condition 3: 24 Hour
Replicate 12.5121616014183
Replicate 27.8190149938398
Replicate 310.088817762046


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12316.p1 GENE.S_Transcript_12316~~S_Transcript_12316.p1 ORF type:complete len:200 (+),score=86.68,HMG_box|PF00505.15|9.6e+03,HMG_box|PF00505.15|1.1e-22,HMG_box_2|PF09011.6|3.6e+03,HMG_box_2|PF09011.6|3.4e-17 S_Transcript_12316:100-699(+)
ATGGGAGGAGGATCAACAAGCACAAACCCACCAAAACCCAGAAAGAGAGTTGAAGCTGACACTCCTTCTACTACTGTTTCTCTCAAGCGTGCTAAAGATGGCAGTGCATTTGCTCGCTGTGAGGAATGTAGTCAGAGTGTTCCGGTTGCCCTTATCGACTTTCACAACTGCAGTCTTGAAGCTAAGATCAAGATGAGCCTTGAAGCTCAGGTTGTTGAAAGGCAAGCTGAAGTCAAGAAGAAGCCTGCTGAGAGGAAGAAATCAACCGGGACATCTGAGACAAAGTCAAAGAAGAGAAAACTGACTAAAGTGAAGGATCCTAACATGCCAAAGCGCCCCCAAACAGCTTACTTCCTCTTCATGGATGACTTTAGGAAGGCCTACAAGGAAGAACATCCTGATTCTAAGGGTGTCAAGGAGGTTGCTAAGGAAGCTGGGGTGAAATGGAGGAACATGACTGAGGAGGAGAAACAACCTTATTTGGACAAGGCTAAAGAGCTCAAGGAAGAGTATGAGAAGGCTATGGAGGCTTACAATGCTGAAAATGAAGAGGATTCTGGTGATGTTCAAGCAGAAGAGTTGTGTGATGAAGATGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12316.p1 GENE.S_Transcript_12316~~S_Transcript_12316.p1 ORF type:complete len:200 (+),score=86.68,HMG_box|PF00505.15|9.6e+03,HMG_box|PF00505.15|1.1e-22,HMG_box_2|PF09011.6|3.6e+03,HMG_box_2|PF09011.6|3.4e-17 S_Transcript_12316:100-699(+)
MGGGSTSTNPPKPRKRVEADTPSTTVSLKRAKDGSAFARCEECSQSVPVALIDFHNCSLEAKIKMSLEAQVVERQAEVKKKPAERKKSTGTSETKSKKRKLTKVKDPNMPKRPQTAYFLFMDDFRKAYKEEHPDSKGVKEVAKEAGVKWRNMTEEEKQPYLDKAKELKEEYEKAMEAYNAENEEDSGDVQAEELCDEDA*

Click here to download the sequence:
Link to NCBI Protein BLAST