Transcript Information: S_Transcript_12318.p1


Annotated TAIR IDAT5G23420.1
Annotated Gene Namehigh-mobility group box 6
Annotated Gene Symbol(s)HMGB6
Annotation TypeHomolog
Chromosome Positionchr5:7888712-7890111 | Reverse length=241
E-Value2E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.406060726174
Replicate 26.4695397950607
Replicate 36.7946922413265
Condition 2: 8 Hour
Replicate 110.101500676537
Replicate 211.774657178803
Replicate 315.866683555588
Condition 3: 24 Hour
Replicate 10.82123622145091
Replicate 26.1345655394625
Replicate 36.2581012433747


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12318.p1 GENE.S_Transcript_12318~~S_Transcript_12318.p1 ORF type:complete len:133 (+),score=43.08 S_Transcript_12318:220-618(+)
ATGGGAGGAGGATCAACAAGCACAAACCCACCAAAACCCAGAAAGAGAGTTGAAGCTGACACTCCTTCTACTACTGTTTCTCTCAAGCGTGCTAAAGATGGCAGTGCTTTTGCTCGCTGCGAGGAATGCAGTCAGAGTGTTCCGGTTGCCCTTATCGACTTTCACAACTGCAGTCTTGAAGCTAAGATCAAGATGAGCCTTGAAGCTCAGGTTGTTGAAAGGCAAGCTGAAGTCAAGAAGAAGCCTGCTGAGAGGAAGAAATCAACCGGGACATCTGAGACAAAGTCAAAGAAGAGAAAACTGACTAAAGTGAAGGATCCTAACATGCCAAAGCGCCCCCAAACAGCTTACTTCCTCTTCATGTTGCTAAGGAAGCTGGGGAGAAATAGAGGAGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12318.p1 GENE.S_Transcript_12318~~S_Transcript_12318.p1 ORF type:complete len:133 (+),score=43.08 S_Transcript_12318:220-618(+)
MGGGSTSTNPPKPRKRVEADTPSTTVSLKRAKDGSAFARCEECSQSVPVALIDFHNCSLEAKIKMSLEAQVVERQAEVKKKPAERKKSTGTSETKSKKRKLTKVKDPNMPKRPQTAYFLFMLLRKLGRNRGA*

Click here to download the sequence:
Link to NCBI Protein BLAST