Transcript Information: S_Transcript_123180.p1


Annotated TAIR IDAT3G27340.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10121303-10122692 | Forward length=141
E-Value1.8E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1213261854129
Replicate 22.0783787264325
Replicate 32.1382882415769
Condition 2: 8 Hour
Replicate 14.7904862306603
Replicate 25.3497898921085
Replicate 33.8615665951053
Condition 3: 24 Hour
Replicate 12.3744438576733
Replicate 21.6423051866918
Replicate 33.10706344121


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_123180.p1 GENE.S_Transcript_123180~~S_Transcript_123180.p1 ORF type:complete len:138 (+),score=21.88,DUF971|PF06155.8|1.6e-19 S_Transcript_123180:164-577(+)
ATGGCGATGTTGGCGATGCGGAAGGTTTTCCGAAGCATTCATGTCGCTACTGATGCTCCTCGCCTTACCAGATTTGCTCTCCATCCACCAAAATGTGTGGTGGTTGAATTTGCTGATGGCAGTACATTCAGTCTACCAGCTGAATTTCTCAGAATATACAGCCCTGCCGCTGACAGCAAGATACGGTCCATTGGGGGTGAAAAGGTAATATTTGGGCGTCGTCATGTTGGAATAATGGCTGCAGAACCTGTGGGGAGCTATGGGATAAGGTTGCTCTTCGATGATTTGCACAAGACAGGGATTTACACATGGGATTACTTTTATTATCTAGGAAGCAATAAGTTCATGCTGATGCGAAATTACATCAAAACATTGAAGAAGCATGGTCTCAGCCGGGATCCAAAAAGGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_123180.p1 GENE.S_Transcript_123180~~S_Transcript_123180.p1 ORF type:complete len:138 (+),score=21.88,DUF971|PF06155.8|1.6e-19 S_Transcript_123180:164-577(+)
MAMLAMRKVFRSIHVATDAPRLTRFALHPPKCVVVEFADGSTFSLPAEFLRIYSPAADSKIRSIGGEKVIFGRRHVGIMAAEPVGSYGIRLLFDDLHKTGIYTWDYFYYLGSNKFMLMRNYIKTLKKHGLSRDPKRK*

Click here to download the sequence:
Link to NCBI Protein BLAST