Transcript Information: S_Transcript_123181.p1


Annotated TAIR IDAT3G27340.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10121303-10122692 | Forward length=141
E-Value2.1E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.53716707039613
Condition 2: 8 Hour
Replicate 10.20704262443818
Replicate 21.0860120698896
Replicate 32.6903496977161
Condition 3: 24 Hour
Replicate 11.272517484889
Replicate 20
Replicate 31.224371087627


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_123181.p1 GENE.S_Transcript_123181~~S_Transcript_123181.p1 ORF type:complete len:103 (+),score=14.91,DUF971|PF06155.8|5.5e-09 S_Transcript_123181:164-472(+)
ATGGCGATGTTGGCGATGCGGAAGGTTTTCCGAAGCATTCATGTCGCTACTGATGCTCCTCGCCTTACCAGATTTGCTCTCCATCCACCAAAATGTGTGGTGGTTGAATTTGCTGATGGCAGTACATTCAGTCTACCAGCTGAATTTCTCAGAATATACAGCCCTGCCGCTGACAGCAAGATACGGTCCATTGGGGGTGAAAAGGTAATATTTGGGCGTCGTCATGTTGGAATAATGGCTGCAGAACCTGTGGGGAGCTATGGGATAAGGTACTTATCAGGTCATGCCCTAGTAACCCAACTAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_123181.p1 GENE.S_Transcript_123181~~S_Transcript_123181.p1 ORF type:complete len:103 (+),score=14.91,DUF971|PF06155.8|5.5e-09 S_Transcript_123181:164-472(+)
MAMLAMRKVFRSIHVATDAPRLTRFALHPPKCVVVEFADGSTFSLPAEFLRIYSPAADSKIRSIGGEKVIFGRRHVGIMAAEPVGSYGIRYLSGHALVTQLI*

Click here to download the sequence:
Link to NCBI Protein BLAST