Transcript Information: S_Transcript_123190.p1


Annotated TAIR IDAT3G27340.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10121303-10122692 | Forward length=141
E-Value6.4E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.83165628859939
Replicate 21.1491036227872
Replicate 30.57633550261252
Condition 2: 8 Hour
Replicate 15.3313475792832
Replicate 25.5929621599317
Replicate 33.7746813467154
Condition 3: 24 Hour
Replicate 11.1377543484685
Replicate 22.1247323352826
Replicate 31.3136481460998


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_123190.p1 GENE.S_Transcript_123190~~S_Transcript_123190.p1 ORF type:complete len:96 (-),score=3.32,DUF971|PF06155.8|2.1e-12 S_Transcript_123190:339-626(-)
ATGATTCCATTAGTCATTGGAAAGAGATCTTGTACGTGTTGTAGCCATTGCGTGTTCGTCATTGCTGATCTCATGCAGGTAATATTTGGGCGTCGTCATGTTGGAATAATGTCTGCAGAACCTGTGGGGAACTATGGGGTAAGGTTGCTCTTCGATGATTTGCACAAGACAGGGATTTACACATGGGATTACTTTTATTATCTAGGAAGCAATAAGTTCATGCTGATGCGAAATTACATCAAAACATTGAAGATTCATGGTCTCAGCCGGGATCCAAAAAGGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_123190.p1 GENE.S_Transcript_123190~~S_Transcript_123190.p1 ORF type:complete len:96 (-),score=3.32,DUF971|PF06155.8|2.1e-12 S_Transcript_123190:339-626(-)
MIPLVIGKRSCTCCSHCVFVIADLMQVIFGRRHVGIMSAEPVGNYGVRLLFDDLHKTGIYTWDYFYYLGSNKFMLMRNYIKTLKIHGLSRDPKRK*

Click here to download the sequence:
Link to NCBI Protein BLAST