Transcript Information: S_Transcript_123191.p1


Annotated TAIR IDAT3G27340.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10121303-10122692 | Forward length=141
E-Value2.5E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9238314145914
Replicate 20.53163348331361
Replicate 30.66660491868436
Condition 2: 8 Hour
Replicate 10
Replicate 21.6172420703417
Replicate 30.51363488204774
Condition 3: 24 Hour
Replicate 10.26319136735656
Replicate 20
Replicate 30.60776010614738


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_123191.p1 GENE.S_Transcript_123191~~S_Transcript_123191.p1 ORF type:5prime_partial len:83 (-),score=5.56 S_Transcript_123191:339-587(-)
GGTAAGGTACTTATCAGGTCATGCCCTAGTAACCCAACTAATTTGAAGCCTAAGAGCATGCCACAAGTCTGGAATATCATGTTTTGGATTCTTCATTGGCCCAGGTTGCTCTTCGATGATTTGCACAAGACAGGGATTTACACATGGGATTACTTTTATTATCTAGGAAGCAATAAGTTCATGCTGATGCGAAATTACATCAAAACATTGAAGATTCATGGTCTCAGCCGGGATCCAAAAAGGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_123191.p1 GENE.S_Transcript_123191~~S_Transcript_123191.p1 ORF type:5prime_partial len:83 (-),score=5.56 S_Transcript_123191:339-587(-)
GKVLIRSCPSNPTNLKPKSMPQVWNIMFWILHWPRLLFDDLHKTGIYTWDYFYYLGSNKFMLMRNYIKTLKIHGLSRDPKRK*

Click here to download the sequence:
Link to NCBI Protein BLAST