Transcript Information: S_Transcript_123193.p1


Annotated TAIR IDAT4G22760.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:11960553-11962289 | Forward length=578
E-Value5.8E-214
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.762125360261
Replicate 27.5457804563028
Replicate 37.6524547291329
Condition 2: 8 Hour
Replicate 115.734880008301
Replicate 214.565005624822
Replicate 313.174378033634
Condition 3: 24 Hour
Replicate 19.8226125417776
Replicate 29.4039079283802
Replicate 39.9399376388218


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_123193.p1 GENE.S_Transcript_123193~~S_Transcript_123193.p1 ORF type:complete len:576 (+),score=104.28,PPR|PF01535.16|7.8e-06,PPR|PF01535.16|0.013,PPR|PF01535.16|0.0028,PPR|PF01535.16|2.5e-09,PPR|PF01535.16|3e-05,PPR|PF01535.16|8.5e-06,PPR|PF01535.16|2.7e-06,PPR|PF01535.16|90,PPR|PF01535.16|0.027,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|0.00027,PPR|PF01535.16|0.0078,PPR|PF01535.16|17,PPR_2|PF13041.2|7.5e-09,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|0.00022,PPR_2|PF13041.2|7.9e-07,PPR_2|PF13041.2|4.6e-05,PPR_2|PF13041.2|0.0018,PPR_2|PF13041.2|3.8e-09,PPR_2|PF13041.2|6e+03,PPR_2|PF13041.2|2.5,PPR_2|PF13041.2|5.5e-11,PPR_2|PF13041.2|6.2e-08,PPR_2|PF13041.2|49,PPR_2|PF13041.2|3.5e+03,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|0.37,PPR_1|PF12854.3|0.072,PPR_1|PF12854.3|6.4e-06,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|0.00071,PPR_1|PF12854.3|0.00037,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|0.75,PPR_1|PF12854.3|0.0025,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|0.00032,PPR_1|PF12854.3|9.9e+03,PPR_3|PF13812.2|0.0036,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.74,PPR_3|PF13812.2|0.00095,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|0.079,PPR_3|PF13812.2|0.0037,PPR_3|PF13812.2|2.4e+03,PPR_3|PF13812.2|4.9,PPR_3|PF13812.2|0.0035,PPR_3|PF13812.2|0.035,PPR_3|PF13812.2|0.53,PPR_3|PF13812.2|6.4e+03,PPR_3|PF13812.2|5.1e+02 S_Transcript_123193:328-2055(+)
ATGCTGCACTCCCAAGTGAATACATTCTTGAACAAATGTTTGACAGTGAATCAAGCGAAGCAAATCCATGCTCAGATTGTTGTTAATTACCTTGATCTTCAAATCCAGTTGGTCCATCAATTGGCTGTTTCTTTGCGTAATTTCACTCCAACGACTTTTCACTATGTCCAGTCTATCCTCCAGCATCTGCCGTATCCTGACTCGGTTTCATGGTCCTCTGTCATACGTTCCCTTGCCCAACATGGTCAATTTAAAGAGGCGTTTGCTCTACATGTGCAAATGCATAGGTTGGGATTGCCCCCTACCACATTTTCTGTATCATCCACTTTGAGAGCATGTGCCCGTATGCCATACAAAATTGGTGGAGTTTCTATCCATGCGCTAGTCACCAAATTTGAAATCTTCCAAAGTGTGTATGTGCAAACAGCTCTTCTTGATTTTTATGCTAAACTGGGTGATATGAAGGTTGCCAAGAGGGTTTTTGATAATATGAGCGAGAGAAATGTGGTATCTTGGAATTCGATGTTGGCAGGGTATCTAAAGGCTGCAGATATTACTGTGGCGAAACAGTTGTTTGATGAGATCCCAGATAAGGATATCGTTTCCTGGAACTCTATGATTTCAGGCTATGCAAGATTAGGAGATATGGAGAAGGCATCCTTTTTGTTCCAGCAAATGCCAGAGAAAAATTTGGCCTCTTGGAATGCAATGATTAGTGGGTTCTTGGAATGTGGAAGAATAGATATGGCATGTGGTTTTTTTGATGCTATGCCTTCGAGAAACAAAATTTCTTGGATAACTATTATATCTGGTTACTCAAAATCAGGGGATGTTGATTCTGCAAAATATCTTTTTGATCTTATGCCTGAAAAAGATGTCATTGCTTTCAATTCCATGATTGCTTGCTATGCTCAGAATAGCCGCCCAAAGGAGGCAATTCATTTGTTCAGTGAGATGTTAGAAACAAAGTTGATTGGCCAGCCCGACGTGATGACTTTGGCTATTGCTATCTCAGCGTGTTCTCAGCTGGGGGACCTGAATTTTGGCTGTTGGATAGAGTCATATATGAGACGAATGGGAATCCAAGTGGATGATCATCTGGGGACTGCGTTAGTTGACTTATATGCAAAGTGTGGAAGTATTGATAAGGCTTATGAGCTGTTCCATGGTTTGGCTAAGAAAGATTTAGTTGCTTATACTGCTATGATTTTGGGTTTTGGCATAAATGGAAAGCCACTTGATGCTATTAAGCTATTTGAAGAGATGGTAGATGCCAATATTTCCCCAAATTTAGTCACATTTACTGGTATTTTGACTGCTTATAGCCATGCTGGGCTGGTTGAAGAAGGCCATCAGTGCTTTAACAAAATGAGTAAGTTTGGGCTGGTGCCTTCAGCTGATCATTATAGTATCATGGTTGATCTTTTAGGTAGGGCTGGAAGGTTAGATGCAGCATATGATCTGATTAAGAGCATGCCAATCACACCTCATTCCGGAGTTTGGGGTGCTTTGCTTCTCGCTTGCAGATTACACAATAATGTCGAGCTTGGGGAGATTGCAGCTCAAAACTGCTTCAATTTAGAAGTTGATAAAGCGGGCTATTCTTCTCTTCTTGCCAATATCTACGCATCAAATGGAAGATGGGATGAGGTCAAGAGATTGAGGAAGACTGTAAATGATGTAGGATCATCCAAAATTCCTGGTTTTAGTTGGGTTGAATCAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_123193.p1 GENE.S_Transcript_123193~~S_Transcript_123193.p1 ORF type:complete len:576 (+),score=104.28,PPR|PF01535.16|7.8e-06,PPR|PF01535.16|0.013,PPR|PF01535.16|0.0028,PPR|PF01535.16|2.5e-09,PPR|PF01535.16|3e-05,PPR|PF01535.16|8.5e-06,PPR|PF01535.16|2.7e-06,PPR|PF01535.16|90,PPR|PF01535.16|0.027,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|0.00027,PPR|PF01535.16|0.0078,PPR|PF01535.16|17,PPR_2|PF13041.2|7.5e-09,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|0.00022,PPR_2|PF13041.2|7.9e-07,PPR_2|PF13041.2|4.6e-05,PPR_2|PF13041.2|0.0018,PPR_2|PF13041.2|3.8e-09,PPR_2|PF13041.2|6e+03,PPR_2|PF13041.2|2.5,PPR_2|PF13041.2|5.5e-11,PPR_2|PF13041.2|6.2e-08,PPR_2|PF13041.2|49,PPR_2|PF13041.2|3.5e+03,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|0.37,PPR_1|PF12854.3|0.072,PPR_1|PF12854.3|6.4e-06,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|0.00071,PPR_1|PF12854.3|0.00037,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|0.75,PPR_1|PF12854.3|0.0025,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|0.00032,PPR_1|PF12854.3|9.9e+03,PPR_3|PF13812.2|0.0036,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.74,PPR_3|PF13812.2|0.00095,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|0.079,PPR_3|PF13812.2|0.0037,PPR_3|PF13812.2|2.4e+03,PPR_3|PF13812.2|4.9,PPR_3|PF13812.2|0.0035,PPR_3|PF13812.2|0.035,PPR_3|PF13812.2|0.53,PPR_3|PF13812.2|6.4e+03,PPR_3|PF13812.2|5.1e+02 S_Transcript_123193:328-2055(+)
MLHSQVNTFLNKCLTVNQAKQIHAQIVVNYLDLQIQLVHQLAVSLRNFTPTTFHYVQSILQHLPYPDSVSWSSVIRSLAQHGQFKEAFALHVQMHRLGLPPTTFSVSSTLRACARMPYKIGGVSIHALVTKFEIFQSVYVQTALLDFYAKLGDMKVAKRVFDNMSERNVVSWNSMLAGYLKAADITVAKQLFDEIPDKDIVSWNSMISGYARLGDMEKASFLFQQMPEKNLASWNAMISGFLECGRIDMACGFFDAMPSRNKISWITIISGYSKSGDVDSAKYLFDLMPEKDVIAFNSMIACYAQNSRPKEAIHLFSEMLETKLIGQPDVMTLAIAISACSQLGDLNFGCWIESYMRRMGIQVDDHLGTALVDLYAKCGSIDKAYELFHGLAKKDLVAYTAMILGFGINGKPLDAIKLFEEMVDANISPNLVTFTGILTAYSHAGLVEEGHQCFNKMSKFGLVPSADHYSIMVDLLGRAGRLDAAYDLIKSMPITPHSGVWGALLLACRLHNNVELGEIAAQNCFNLEVDKAGYSSLLANIYASNGRWDEVKRLRKTVNDVGSSKIPGFSWVEST*

Click here to download the sequence:
Link to NCBI Protein BLAST