Transcript Information: S_Transcript_12324.p1


Annotated TAIR IDAT5G23420.1
Annotated Gene Namehigh-mobility group box 6
Annotated Gene Symbol(s)HMGB6
Annotation TypeHomolog
Chromosome Positionchr5:7888712-7890111 | Reverse length=241
E-Value5E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3109852825212
Replicate 20
Replicate 30.45425458333991
Condition 2: 8 Hour
Replicate 11.5757677574236
Replicate 21.8735045658884
Replicate 31.260050104728
Condition 3: 24 Hour
Replicate 10
Replicate 20.89315513601369
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12324.p1 GENE.S_Transcript_12324~~S_Transcript_12324.p1 ORF type:complete len:203 (+),score=73.17,HMG_box|PF00505.15|9.8e+03,HMG_box|PF00505.15|1.1e-22,HMG_box_2|PF09011.6|3.8e+03,HMG_box_2|PF09011.6|3.5e-17 S_Transcript_12324:79-687(+)
ATGATTGTGAGTGTATTGAGGTTTTTGATCAAGAACTCATTGATCTTGTTGAAGGCGACAAACTTAGTGATGACCGAAACTCTGAGTTTGATGATGATGTTGATGATCACTTTTTCAATCCTGTTAAGCGAGGAATGCAGTCAGAGTGTTCCGGTTGCCCTTATCGACTTTCACAACTGCAGTCTTGAAGCTAAGATCAAGATGAGCCTTGAAGCTCAGGTTGTTGAAAGGCAAGCTGAAGTCAAGAAGAAGCCTGCTGAGAGGAAGAAATCAACCGGGACATCTGAGACAAAGTCAAAGAAGAGAAAACTGACTAAAGTGAAGGATCCTAACATGCCAAAGCGCCCCCAAACAGCTTACTTCCTCTTCATGGATGACTTTAGGAAGGCCTACAAGGAAGAACATCCTGATTCTAAGGGTGTCAAGGAGGTTGCTAAGGAAGCTGGGGTGAAATGGAGGAACATGACTGAGGAGGAGAAACAACCTTATTTGGACAAGGCTAAAGAGCTCAAGGAAGAGTATGAGAAGGCTATGGAGGCTTACAATGCTGAAAATGAAGAGGATTCTGGTGATGTTCAAGCAGAAGAGTTGTGTGATGAAGATGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12324.p1 GENE.S_Transcript_12324~~S_Transcript_12324.p1 ORF type:complete len:203 (+),score=73.17,HMG_box|PF00505.15|9.8e+03,HMG_box|PF00505.15|1.1e-22,HMG_box_2|PF09011.6|3.8e+03,HMG_box_2|PF09011.6|3.5e-17 S_Transcript_12324:79-687(+)
MIVSVLRFLIKNSLILLKATNLVMTETLSLMMMLMITFSILLSEECSQSVPVALIDFHNCSLEAKIKMSLEAQVVERQAEVKKKPAERKKSTGTSETKSKKRKLTKVKDPNMPKRPQTAYFLFMDDFRKAYKEEHPDSKGVKEVAKEAGVKWRNMTEEEKQPYLDKAKELKEEYEKAMEAYNAENEEDSGDVQAEELCDEDA*

Click here to download the sequence:
Link to NCBI Protein BLAST