Transcript Information: S_Transcript_123253.p1


Annotated TAIR IDAT5G53350.1
Annotated Gene NameCLP protease regulatory subunit X
Annotated Gene Symbol(s)CLPX
Annotation TypeOrtholog
Chromosome Positionchr5:21644060-21647503 | Forward length=579
E-Value1.2E-272
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.364661475657
Replicate 224.53534355965
Replicate 325.438256667035
Condition 2: 8 Hour
Replicate 141.988958176148
Replicate 244.78226943228
Replicate 341.676157213877
Condition 3: 24 Hour
Replicate 136.345366497282
Replicate 230.947825462874
Replicate 340.4422436151


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_123253.p1 GENE.S_Transcript_123253~~S_Transcript_123253.p1 ORF type:complete len:580 (+),score=143.06,AAA_2|PF07724.10|2.8e-43,ClpB_D2-small|PF10431.5|4.6e-14,AAA|PF00004.25|4.7e-14,AAA_5|PF07728.10|2.9e-05 S_Transcript_123253:508-2247(+)
ATGGCTGCAGCTGTTCTAAGATCAAAATCAACCAGAGAAACAGCAATCTTAACAGCCTCACAATTTAGATACTACTTTGTTAGGAATAATAATAATAATAATATGCATATGGGTCATAGAACTAGTAGTAGTAATTATCATAGTGCCCCAAAACCTAAACAAGATGATTACTTTACTTCCTTATACAAGCCTAGTAGAGGGGGAAAAATTGTTCAAAAAGGGCCCACCTTCCTGGGTGGTTCTTCTGATCATCAATTTAGGAAATTGGGTTCTGATTCTAATGTTTTGAGGTGTGTTGGGGACCCACCTGAGATGTGGCAGCCTCCTGCTGATGGGGTTATGGTCCGGGCCGGGCTTAATTCCGGCCGAGGCGGTGGTGGCGGCGGCGGCAATGGTGGTGGGGCTGGTGGGCCGAGCTCGGGTTCCGGTGGTAGTGGTGGGTTTGGATCCAACTCTAAGGATGGATGCTGGGGTGGGTCAAATTTGGGAAGTGGTTTCCCTACCCCTAAGGAAATTTGCAAAGGGCTTGATAAGTTTGTGATTGGGCAAGAGAAAGCGAAGAAGGTTCTCTCTGTGGCTGTGTACAATCACTACAAAAGAATCTATTATGAGAATATGCAAAGGCAATCAGGGGAGTCGGGTAATGAGAAACCAGACCCAACTGATGAACAAGTGGAGCTTGAAAAAAGCAACATTCTCTTAATGGGACCCACAGGCTCAGGGAAGACTTTACTTGCAAAAACAATGGCAAAGCTTGTAAATGTGCCCTTCGTCATTGCTGATGCAACCACATTGACTCAGGCAGGATATGTTGGTGAAGATGTAGAGTCGATTTTATACAAGCTCCTCATGGTTGCTGATTATAATGTGGCAGCCGCCCAACAAGGCATCGTGTACATTGATGAAGTTGACAAAATTACTAAAAAGGCTGAGAGTCTTAATATCAGTAGGGATGTATCTGGAGAAGGTGTCCAGCAGGCTTTACTGAAAATGTTGGAAGGAACGATTGTCAATGTTCCTGAGAAAGGAGCTCGAAAGCATCCAAGGGGTGACAATATCCAGATTGACACAAAGGATATTCTTTTCATCTGTGGCGGTGCTTTTATTGACTTGGAGAAAACCATCTCAGAAAGGCGCCATGATTCTTCTATTGGTTTTGGTGCTCCTGTACGTGCAAACATGAGGACTGGTGGTCCCACAAGCGCTGCTATTACTTCATCCTTGTTGGACAATGTAGAAAGTTCTGACCTAATTGCTTACGGGCTGATACCTGAATTTGTTGGAAGATTTCCTATCCTTGTTAATTTGTCAGCCCTTACGGAAGATCAACTTGTTGAGGTTCTGACAGAGCCAAAGAATGCACTAGGGAAGCAATACAGAAAGATGTTCCAAATGAACGAGGTGAAATTGCATTTTACAGAGAAAGCTTTAAGATTAATTGCTAAAAAGGCAATAAGCAAGAACACAGGGGCTCGGGGATTAAGAGCGATACTGGAGAACATCTTGATGGAGGCCATGTACGAGATTCCTGATACAAGAGCGGGTGATGATATCATTGACGCTGTAGTTGTTGACGAAGAAGCAGTAGGGTTAGAGGGTAAAGGGCGTGGAGCTAGAGTTCTTTACGGCAAGGGAGCCTTGGACCGCTATCTTTCAGAGCAGAAACCGAATGAGGTTGAAGGTTCTGAAGCAGAAACCGAGGCAGAAAATGACCTCCAATCTGTGGTTGCTAGCATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_123253.p1 GENE.S_Transcript_123253~~S_Transcript_123253.p1 ORF type:complete len:580 (+),score=143.06,AAA_2|PF07724.10|2.8e-43,ClpB_D2-small|PF10431.5|4.6e-14,AAA|PF00004.25|4.7e-14,AAA_5|PF07728.10|2.9e-05 S_Transcript_123253:508-2247(+)
MAAAVLRSKSTRETAILTASQFRYYFVRNNNNNNMHMGHRTSSSNYHSAPKPKQDDYFTSLYKPSRGGKIVQKGPTFLGGSSDHQFRKLGSDSNVLRCVGDPPEMWQPPADGVMVRAGLNSGRGGGGGGGNGGGAGGPSSGSGGSGGFGSNSKDGCWGGSNLGSGFPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYYENMQRQSGESGNEKPDPTDEQVELEKSNILLMGPTGSGKTLLAKTMAKLVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRHDSSIGFGAPVRANMRTGGPTSAAITSSLLDNVESSDLIAYGLIPEFVGRFPILVNLSALTEDQLVEVLTEPKNALGKQYRKMFQMNEVKLHFTEKALRLIAKKAISKNTGARGLRAILENILMEAMYEIPDTRAGDDIIDAVVVDEEAVGLEGKGRGARVLYGKGALDRYLSEQKPNEVEGSEAETEAENDLQSVVASM*

Click here to download the sequence:
Link to NCBI Protein BLAST