Transcript Information: S_Transcript_123545.p1


Annotated TAIR IDAT4G39952.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:18527680-18530007 | Forward length=775
E-Value6.4E-277
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5933898828707
Replicate 22.2203316879537
Replicate 31.8325266427017
Condition 2: 8 Hour
Replicate 13.2870983800931
Replicate 23.9328854933532
Replicate 34.2088616290091
Condition 3: 24 Hour
Replicate 12.1149186564142
Replicate 21.5879103652218
Replicate 31.9599295652383


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_123545.p1 GENE.S_Transcript_123545~~S_Transcript_123545.p1 ORF type:5prime_partial len:785 (+),score=140.36,PPR|PF01535.16|4.3e+03,PPR|PF01535.16|0.018,PPR|PF01535.16|0.016,PPR|PF01535.16|0.0015,PPR|PF01535.16|3.6,PPR|PF01535.16|8.5e-07,PPR|PF01535.16|15,PPR|PF01535.16|0.027,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|0.058,PPR|PF01535.16|2e-08,PPR|PF01535.16|1.6e+02,PPR|PF01535.16|0.012,PPR|PF01535.16|3e-07,PPR|PF01535.16|0.12,PPR|PF01535.16|2e+02,PPR|PF01535.16|1e+03,PPR|PF01535.16|0.76,PPR_2|PF13041.2|3e-05,PPR_2|PF13041.2|2,PPR_2|PF13041.2|0.0031,PPR_2|PF13041.2|3.2e+02,PPR_2|PF13041.2|8.3e-07,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|7.8,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|2.7e-12,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|2.3e-10,PPR_2|PF13041.2|0.43,PPR_2|PF13041.2|2.7,PPR_3|PF13812.2|4.6e+02,PPR_3|PF13812.2|13,PPR_3|PF13812.2|18,PPR_3|PF13812.2|6e+02,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|4.3e+03,PPR_3|PF13812.2|5.7e+02,PPR_3|PF13812.2|36,PPR_3|PF13812.2|0.0096,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|24,PPR_3|PF13812.2|0.0066,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|35,PPR_3|PF13812.2|3.2,PPR_1|PF12854.3|17,PPR_1|PF12854.3|8.9e+03,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|25,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|5.5e+03,PPR_1|PF12854.3|25,PPR_1|PF12854.3|34,PPR_1|PF12854.3|1.9e-05,PPR_1|PF12854.3|5.5,PPR_1|PF12854.3|0.00064,PPR_1|PF12854.3|2e+02,PPR_1|PF12854.3|1.1e+03 S_Transcript_123545:3-2357(+)
AAAACACCAAGGAGGAGTTCCATGTCCAAATTCAACCCAACTTGTGTACTTAAACAAATTTCTCATCTCCAATTCTCCACAACTTCCCACATCAACAACTATATAAACTGTCAGTTGGATTCTTTTCTCTCTAAACACTTCTTAGCCTCCCAATCTCTCCTCCCATCTCATGCTTTCATCATAGTCACTGGCAACCACAACAATGTCTTCATTTCATCAAAGCTCATTTCTTTATATGCTTCTCTTTCTAAACCCAACTCGTCCACCAAAGTATTTTATCAAACCCCTTGTAAAGACCCATTTCTTTGGAATTCTATCATCAAATCCCACTTTTCCAATGGTGGGTACCAAAAAGCCCTTGACTTTTTTCTGGGTATGCGTTTTTCCAATTGCCCACCTAATAATTTCACCATCCCAATGGCTGCCACTGCTTGCGCCGAGCTCGGGGAGGTTGTTTATGGAGAGATCATTCATGGGTTGGTGACAAAATTTGGTCTTTTTGGTGGGAATCCTGCCATTGGATCTTCTTTAGTGTACTTGTATTCGAAATGTGGCCGTATGGGTAATGCATACCGTGTGTTCGATGAAATGCCTGTTAGAGATGTGGTCGCTTGGACCGCGCTTGTAGTTGGTTATTTGCAGAATGGTGAGAGTGAGAGGGCTTTGGAGTGTCTTTGTTTGATGCATAGGGTTGGTGAGGATGGCGAAAGGCCGAATGCTAGAACCCTTGAAGGGGGGTTCCAAGCTTGTGGGAATGTAGGGGCTTTGACAGCAGGGAAATGCTTGCAGGGTTTTGCTATAAAGAGTGGGTATGGGGTTTCCCAAGATATTCAAACATCAGTTTTGTCAATGTATTCCAAGTTGGGGTCCCTTGAAGAAGCTCATCATTCATTTTGTGAAGTAGGAGATAAAGATCTTATGTGTTGGACATCAGTCATTTCTGCTTATGCAAGATTGGGGTGTGTTACTGAATGTTTAGGCTTGTTTTCGCAAATGCGGAATTCTGGAATATACCCTGATGAAATTGTTCTTAGCTGTGTGCTTTCATCCTTTAATGATTTGATGTGGGTCCGTGAAGGGAAGGCATTTCATGGTTTATTAGTGCGGAGAAATTATGTTCATTACCAAGTGGTTCATAGGGCATTGATAGCTATGTACTGTAGATTAGCAATGGTTGCTGATGGAGAAAGGATCTTTGACAGAATACATGACAAAAAACCAGAGACATGGAACTTGATGGTCTATGAATATGGAAAAGCAGGACTTGGCAGAAAGTGTATTGTTCTTCTTCGAGTTATGCTGCATCAAGGGATAGGTTGTGATTCCAATAGTTTGATATCTGTAATTTCTTCATGTTCACAATTGGGCACAATCCGTCTTGGTAAATCCTTGCACTGCCATATCATTAAGGGTCAACTTGATGAGAATGTTTCAATTTCCAATTCACTCATAGATATATATGCAAAATGTGGCAATCTAACCCTTGCAAAAAGGATCTTTGGTAGGACACAAAGAGATACTGTCACGTGGAACACAATGATCTCTGCCTATGTTTGCAGGGAAGATATGGTGGAGGCAATGTCATTATTTGATGAAATGATATTAGAAGGATGGAAACCAAACTCAGCAACTCTAGTGAGTGTTCTCTCTGCTTGCTCTCGGTTAGCTGCATTAGAGAAAGGAATGAAGATACACAACTATGTCAAGGAAATGGGATTGGAGTTAACAATCTCAGTCGCAACAGCATTAATTGACATGTATGGAAAATGTGGACAGGTCGGAAGGTCACGACAGATTTTTGATTCAATGAATGAAAGGGATGTCGTTGCTTGGAATGTGATGATTTCTTGTTATGGCATGCATGGAGATGCACAATCTGCCATTGAGATCTTCAAACAGATGGAAGAATCTACTATCAGACCAAATGGGCTGACCTTTCTAGCTGTTTTGTCAGCTTGTAGCCATGCGGGACTTACTAAAGAAGGCAGATATTATTTTCATAAGATGAAAGATTACTCTGTAACACCCACCTTAAAGCACTATGCCTGCATTGTGGATCTTCTTGGTAAGACTGGAAATTTGCAGGAAACTGAGGATTTGGTTCTTTCGATGCCAATTGCTCCTGATGGGGGTCTTTGGGGAGCTTTGTTGAATGCTTGTAAAATCCACAATGATATAGAGATGGGGATAAGGGTTGCCAATTATGCCATTGAGGCTGATCCAGAAAATGATGGGTATTATATATCTGTATCAAATATGTTGGATTCCTCAGGAAAGTGGGAGGAAGCAGAAAAGCTTAGGGCAATGATGAAGCAAAAGGGAGTGAGGAAGAAAATTGGCTGGAGCACACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_123545.p1 GENE.S_Transcript_123545~~S_Transcript_123545.p1 ORF type:5prime_partial len:785 (+),score=140.36,PPR|PF01535.16|4.3e+03,PPR|PF01535.16|0.018,PPR|PF01535.16|0.016,PPR|PF01535.16|0.0015,PPR|PF01535.16|3.6,PPR|PF01535.16|8.5e-07,PPR|PF01535.16|15,PPR|PF01535.16|0.027,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|0.058,PPR|PF01535.16|2e-08,PPR|PF01535.16|1.6e+02,PPR|PF01535.16|0.012,PPR|PF01535.16|3e-07,PPR|PF01535.16|0.12,PPR|PF01535.16|2e+02,PPR|PF01535.16|1e+03,PPR|PF01535.16|0.76,PPR_2|PF13041.2|3e-05,PPR_2|PF13041.2|2,PPR_2|PF13041.2|0.0031,PPR_2|PF13041.2|3.2e+02,PPR_2|PF13041.2|8.3e-07,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|7.8,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|2.7e-12,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|2.3e-10,PPR_2|PF13041.2|0.43,PPR_2|PF13041.2|2.7,PPR_3|PF13812.2|4.6e+02,PPR_3|PF13812.2|13,PPR_3|PF13812.2|18,PPR_3|PF13812.2|6e+02,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|4.3e+03,PPR_3|PF13812.2|5.7e+02,PPR_3|PF13812.2|36,PPR_3|PF13812.2|0.0096,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|24,PPR_3|PF13812.2|0.0066,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|35,PPR_3|PF13812.2|3.2,PPR_1|PF12854.3|17,PPR_1|PF12854.3|8.9e+03,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|25,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|5.5e+03,PPR_1|PF12854.3|25,PPR_1|PF12854.3|34,PPR_1|PF12854.3|1.9e-05,PPR_1|PF12854.3|5.5,PPR_1|PF12854.3|0.00064,PPR_1|PF12854.3|2e+02,PPR_1|PF12854.3|1.1e+03 S_Transcript_123545:3-2357(+)
KTPRRSSMSKFNPTCVLKQISHLQFSTTSHINNYINCQLDSFLSKHFLASQSLLPSHAFIIVTGNHNNVFISSKLISLYASLSKPNSSTKVFYQTPCKDPFLWNSIIKSHFSNGGYQKALDFFLGMRFSNCPPNNFTIPMAATACAELGEVVYGEIIHGLVTKFGLFGGNPAIGSSLVYLYSKCGRMGNAYRVFDEMPVRDVVAWTALVVGYLQNGESERALECLCLMHRVGEDGERPNARTLEGGFQACGNVGALTAGKCLQGFAIKSGYGVSQDIQTSVLSMYSKLGSLEEAHHSFCEVGDKDLMCWTSVISAYARLGCVTECLGLFSQMRNSGIYPDEIVLSCVLSSFNDLMWVREGKAFHGLLVRRNYVHYQVVHRALIAMYCRLAMVADGERIFDRIHDKKPETWNLMVYEYGKAGLGRKCIVLLRVMLHQGIGCDSNSLISVISSCSQLGTIRLGKSLHCHIIKGQLDENVSISNSLIDIYAKCGNLTLAKRIFGRTQRDTVTWNTMISAYVCREDMVEAMSLFDEMILEGWKPNSATLVSVLSACSRLAALEKGMKIHNYVKEMGLELTISVATALIDMYGKCGQVGRSRQIFDSMNERDVVAWNVMISCYGMHGDAQSAIEIFKQMEESTIRPNGLTFLAVLSACSHAGLTKEGRYYFHKMKDYSVTPTLKHYACIVDLLGKTGNLQETEDLVLSMPIAPDGGLWGALLNACKIHNDIEMGIRVANYAIEADPENDGYYISVSNMLDSSGKWEEAEKLRAMMKQKGVRKKIGWSTL*

Click here to download the sequence:
Link to NCBI Protein BLAST