Transcript Information: S_Transcript_123654.p1


Annotated TAIR IDAT1G63160.1
Annotated Gene Namereplication factor C 2
Annotated Gene Symbol(s)RFC2
Annotation TypeOrtholog
Chromosome Positionchr1:23422068-23423771 | Reverse length=333
E-Value1.2E-220
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.225818331537
Replicate 22.1394220176984
Replicate 32.8502410311019
Condition 2: 8 Hour
Replicate 15.0405468022314
Replicate 22.9151196712371
Replicate 34.5215434313597
Condition 3: 24 Hour
Replicate 13.1112409819937
Replicate 21.5109207717565
Replicate 32.4457740029203


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_123654.p1 GENE.S_Transcript_123654~~S_Transcript_123654.p1 ORF type:complete len:330 (+),score=76.58,Rep_fac_C|PF08542.7|5.3e-17,AAA|PF00004.25|1.7e-14,DNA_pol3_delta2|PF13177.2|21,DNA_pol3_delta2|PF13177.2|8e-11,AAA_14|PF13173.2|4e-07,Rad17|PF03215.11|0.00052,Rad17|PF03215.11|3.5,AAA_16|PF13191.2|0.00057,AAA_16|PF13191.2|28,Mg_chelatase|PF01078.17|6.8e-05,Mg_chelatase|PF01078.17|1.4e+02 S_Transcript_123654:192-1181(+)
ATGGCGTCAAGCAGCAGCAGCAGTTACGACATACCATGGGTGGAGAAGTATCGCCCCAGCAAAGTCTCCGACATCGTCGGTAACGAAGACGCTGTTTCTCGCCTTCAAGTCATTGCTCGTGACGGCAACATGCCTAATCTCATCCTCGCCGGTCCTCCAGGTACTGGGAAAACAACAAGCATACTGGCTCTTGCGCATGAGCTTTTAGGGCCAAACTGCAAGGAGGCTGTTTTGGAGTTGAACGCATCGGATGATAGGGGTATTGATGTTGTAAGGAACAAAATTAAGATGTTTGCCCAGAAGAAAGTTACTCTCCCCCCTGGTCGACACAAGGTTGTAATATTGGATGAAGCTGACAGTATGACAACGGGAGCTCAACAAGCATTGAGGAGGACTATGGAAATATACTCCAACACCACTCGCTTTGCTCTTGCTTGTAATACCTCATCTAAAATCATTGAGCCCATTCAGAGTAGATGTGCTTTGGTCCGCTTTTCAAGGTTATCGGATCAAGAGATCCTTGGTCGTCTGATGATAGTCATTGATGCTGAGAAGGTTCCCTATGTTCCAGAAGGTCTTGAAGCTATAATATTCACTGCTGATGGTGACATGAGGCAAGCACTGAATAACTTGCAAGCTACTTACAGTGGATTCCGGTTTGTCAACCAAGAAAATGTTTTCAAGGTCTGTGACCAGCCTCATCCTTTGCACGCAAAGAATATGATCCGCAATGTCCTTGAAGGGAAGTTTGATGATGCATGTGCTGGTCTGAAGCAGCTTTATGATATGGGTTATTCGCCTACTGACATAATCACCACTCTTTTCCGTGTTGTCAAAAATTATGACATGGCTGAGTATTTGAAGCTGGAATTTATGAAGGAAACCGGCTTTGCCCACATGAGAATCTGTGATGGAGTTGGTTCTTATCTTCAGCTTTGTGGACTTCTTGCCAAGCTTTCTCTAGTTCGGGAAACAGCCAAAGCAGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_123654.p1 GENE.S_Transcript_123654~~S_Transcript_123654.p1 ORF type:complete len:330 (+),score=76.58,Rep_fac_C|PF08542.7|5.3e-17,AAA|PF00004.25|1.7e-14,DNA_pol3_delta2|PF13177.2|21,DNA_pol3_delta2|PF13177.2|8e-11,AAA_14|PF13173.2|4e-07,Rad17|PF03215.11|0.00052,Rad17|PF03215.11|3.5,AAA_16|PF13191.2|0.00057,AAA_16|PF13191.2|28,Mg_chelatase|PF01078.17|6.8e-05,Mg_chelatase|PF01078.17|1.4e+02 S_Transcript_123654:192-1181(+)
MASSSSSSYDIPWVEKYRPSKVSDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVIDAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHAKNMIRNVLEGKFDDACAGLKQLYDMGYSPTDIITTLFRVVKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKLSLVRETAKAA*

Click here to download the sequence:
Link to NCBI Protein BLAST