Transcript Information: S_Transcript_123779.p2


Annotated TAIR IDAT4G17750.1
Annotated Gene Nameheat shock factor 1
Annotated Gene Symbol(s)HSF1, HSFA1A, ATHSF1, ATHSFA1A
Annotation TypeOrtholog
Chromosome Positionchr4:9869969-9871603 | Reverse length=495
E-Value8.7E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33266251543976
Replicate 20.4136773042034
Replicate 31.0374039047025
Condition 2: 8 Hour
Replicate 18.5301561268532
Replicate 26.711554591918
Replicate 37.7269947568057
Condition 3: 24 Hour
Replicate 10.27306104363243
Replicate 20.56659528940868
Replicate 30.31527555506395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_123779.p2 GENE.S_Transcript_123779~~S_Transcript_123779.p2 ORF type:3prime_partial len:160 (+),score=1.74 S_Transcript_123779:248-724(+)
ATGCAGCCCGAACCGTCTCGGACCGGGCCCAAGTGTGATAGCTGCTTCCGGAACGACGCCGTGGTGTACTGCGGGGCTGACTCGGCGGACCTGTGCCTGCTGTGCGACAGGGAGGTCCACTCAGCGAACGCCTTGTCCCTAAAGCACGTCCGGGTCCCGACCCAATTTCCCGAACCCGGGCCCGAGGACGGGTTCTCGGGATGCCCATCGGCGGCTGAGCTGGCGAACTTCCTGGGGCTGCCCCCCAATTCGATGAGCCTGCCCGAGCGGGCAGGTGGGGAGGAGGCCAGGACAGTTTACGGGCAGCTGGTGGCGCTGAGGAGGTGGGATATTGAGGAGAGAGAGAGCGCCTCGGAGTTCGGGCCTGGGACCCCCAGCTTGTGTGGGAATAATAATAATTATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_123779.p2 GENE.S_Transcript_123779~~S_Transcript_123779.p2 ORF type:3prime_partial len:160 (+),score=1.74 S_Transcript_123779:248-724(+)
MQPEPSRTGPKCDSCFRNDAVVYCGADSADLCLLCDREVHSANALSLKHVRVPTQFPEPGPEDGFSGCPSAAELANFLGLPPNSMSLPERAGGEEARTVYGQLVALRRWDIEERESASEFGPGTPSLCGNNNNYNNNNNNNNNNNNNNNNNNNNNNNNN

Click here to download the sequence:
Link to NCBI Protein BLAST