Transcript Information: S_Transcript_12380.p1


Annotated TAIR IDAT3G03050.1
Annotated Gene Namecellulose synthase-like D3
Annotated Gene Symbol(s)CSLD3, KJK, ATCSLD3
Annotation TypeOrtholog
Chromosome Positionchr3:687873-691629 | Forward length=1145
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7160484394696
Replicate 29.0948791887747
Replicate 38.198561280832
Condition 2: 8 Hour
Replicate 19.3310223134355
Replicate 28.2453450881787
Replicate 38.8986682578001
Condition 3: 24 Hour
Replicate 17.1353593235653
Replicate 26.3537847301376
Replicate 37.1370675871245


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_12380.p1 GENE.S_Transcript_12380~~S_Transcript_12380.p1 ORF type:complete len:1145 (+),score=227.15,Cellulose_synt|PF03552.10|0,zf-RING_4|PF14570.2|2.1e-15,Glyco_trans_2_3|PF13632.2|8.7e+02,Glyco_trans_2_3|PF13632.2|9.2e-07,Glyco_trans_2_3|PF13632.2|72,Glyco_tranf_2_3|PF13641.2|7.6,Glyco_tranf_2_3|PF13641.2|3.3e+03,Glyco_tranf_2_3|PF13641.2|0.0022 S_Transcript_12380:473-3907(+)
ATGGCGTCGTCCAGATCTTTTAAGCACAGTCGATCAGCTCTATCATCGAGCTCTGAGGCTTCTGAGATGCAGCAACTCAGGCCTCCATTGCCCCCTACTGTGACTTTTGCTCGACGTACTTCCTCAGGCCGTTATGTTAACTACTCGAGGGACGATCTTGATAGTGAACTTGGGAGTGGAGAGTATGCAAATTATACAGTTCAGATACCCCAGACTCCTGATAACCAACCAATGGCGGATCCCACTGTATCTCAGAGGGTTGAGGAACAATATGTGTCTAACTCTCTATTTACAGGGGGGTTCAATAGTGTCACTAGGGCTCATCTCATGGACAAGGTCATTGAGTCAGAAGCTAGCCATCCTCAGATGGCTGGTGCCAAAGGGTCTTCCTGTGCCATTCCTGGATGTGACGGGAACGTCATGAGTGACGAGAGGGGTGTGGATATTCTTCCTTGTGAGTGTGATTTCAAGATATGTCGTGATTGTTATATTGATGCAGTCAAATCTGGGGAATCAATGTGCCCTGGTTGTAAGGAGCCTTACAAGAATACTGACTTGGCTGACACCACTGGTGAAAGGCCACTTCCGCTTCCTGCTCCTGGTGGTGGGATGTCGAAGATGGAGAGGAGATTGTCGCTAATGAAATCGACAAAGTCGGTCCTGATGAGGAGCCAGACTGGGGATTTTGATCACAGTCGTTGGCTGTTTGAAACTAAGGGAACTTATGGTTATGGGAATGCTATTTGGCCTAAGGAGGGTGGTCCTGCTTCTGGCAATGACAACAATGGGGAGGTGCATGAACCTCAAGAACTTATGAGCAAACCATGGAGGCCCCTTACTCGTAAACTCAAGATTCCTGCTGCTATTCTTAGTCCTTACCGGCTTCTCATATTTGTGCGGATGGCTGTTCTCGGTCTCTTCCTTGCTTGGAGAGTCAAACATAAAAATGAGGATGCTATATGGCTTTGGGGAATGTCTGTGGTTTGTGAACTTTGGTTTGCCTTCTCGTGGCTTCTTGATCAGCTGCCCAAACTGTGTCCAGTCAATCGAGCTACAGATCTCAATGTCCTCAAAGAGAAGTTTGAGACACCTAGTCCCAACAATCCAACTGGAAAATCAGATCTTCCAGGGATAGATGTCTTTGTGTCTACTGCAGATCCAGAGAAGGAGCCCCCTCTTGTTACTGCTAATACTATCTTGTCTATTTTAGCCGCTGACTACCCTGTTGAGAAGCTCTCTTGCTATGTATCTGATGATGGAGGTGCCCTTCTTACCTTTGAGGCCATGGCTGAAGCAGCAAGCTTTGCTAATGTATGGGTACCTTTCTGTCGCAAACATAATATTGAGCCGAGGAATCCGGAATCATATTTTAGTCTTAAAAAGGATCCCTACAAAAATAAGGTTCGCCCTGATTTTGTAAAGGATCGCAGGCGGGTAAAGCGGGAATATGATGAATTCAAGGTTCGGATCAATGGTTTGCCCGACTCTATCCGACGGCGATCTGATGCTTACCATGCCCGGGAGGAAATAAAAGCCCTCAAACTCCAGAGACAAAATCCAACTGACGAACCTATGGATGTTATCAAAATCCCAAAAGCTACTTGGATGGCTGATGGTACTCATTGGCCTGGCACTTGGATTCATTCTTCTCAGGAGCACTCTAGGGGGGATCATGCAGGAGTCATTCAGGTTATGCTCAAGCCTCCTAGTGAAGATCCACTGCATGGAGCTACTGATGAATCTAGGCTTATTGACCTCACTGATGTGGACATCCGTCTTCCCATGCTGGTGTATGTGTCTCGTGAGAAGCGCCCTGGATATGATCACAATAAGAAGGCTGGTGCCATGAATGCTTTGGTGAGGGCATCTGCAATAATGTCTAATGGACCTTTCATCCTCAACCTTGACTGTGACCATTATATTTACAACTCCCAAGCTATGAGAGAAGGCATGTGTTTCATGATGGATAGGGGTGGGGATCGCATTTGTTATGTCCAATTCCCCCAAAGATTTGAAGGAATTGACCCTTCCGATCGATATGCTAATAATAACACGGTTTTCTTTGATGTCAACATGAGGGCCCTTGATGGACTTCAAGGCCCAGTTTATGTCGGGACTGGTTGCCTCTTCCGAAGAATGGCCCTCTATGGATTTGATCCACCTCGTTCAAAAGACCGTGCTCCAAGTTTCTGGGATTGTTGCTTCCCTTGTCGCAAGAAACTTGCAGCAGCTGAAGAGAACCGGGCTCTGAGGATGGGTGACTCTGACGATGAAGAGATGCCCTTTGCTACCTTTCCTAAGAAATTTGGCAACTCCAGGTTCCTCCTTGATTCAATCCCTGTGGCAGAGTTTCAAGGCCGTCCTTTGGCTGATCATCCAGCTGTCAAGAATGGAAGGCCACCTGGTGCTCTCACAATTGATCGAGAGTTGCTTGATGCATCGACAGTTGCTGAGGCAATCAATGTCATCTCTTGCTGGTATGAGGACAAGACCGAATGGGGGGAACGTGTTGGATGGATTTATGGTTCTGTAACAGAAGATGTGGTCACAGGATATAGGATGCACAACAGGGGATGGAGGTCTATTTACTGTGTCACAAAGCGTGATGCTTTTAGGGGAACTGCTCCAATTAATCTCACTGATCGTCTCCACCAGGTTCTTCGTTGGGCTACTGGTTCTGTTGAGATCTTCTTCTCCCGCAACAATGCGTTTCTTGCCAGCCCAAAAATGAAGATTCTACAGAGAATAGCGTATCTTAATGTGGGTATCTACCCCTTCACCTCTATTTTCCTGATAGTCTATTGCTTCCTACCTGCACTCTCTCTGTTCTCTGGCCAGTTCATCGTGCAGACTCTAAACGTCACTTTCCTTACCTATCTATTGATCATTACCGTGACACTTTGTATTCTTGCAATGCTTGAGATCAAATGGTCTGGCATTGCGTTGGAGGAATGGTGGCGTAATGAGCAGTTTTGGTTAATCGGAGGGACAAGTGCGCACCTTGCTGCAGTGCTACAGGGATTACTGAAAGTGATAGCTGGAATTGAAATCTCCTTTACACTGACTTCTAAATCAGGTGGTGATGATAACGATGATGAGTTTGCTGATCTTTACATCGTCAAATGGACATCCTTGATGATTCCGCCAATCCTGATCATGATGGTCAACTTGATAGCAATAGCGGTTGGGTTCAGCCGTACCATATACAGTACAATACCCCAGTGGAGTAAGCTGATAGGAGGGGTATTCTTCAGCTTTTGGGTCTTGGCGCATTTATACCCCTTCGCTAAAGGTCTCATGGGAAGAAGAGGGAGGACACCGACAATTGTTTTTGTATGGTCAGGACTTCTTGCCATTACAATATCCCTCCTCTGGGTGGCTATTAAACCTCCTTCAAATACAGACCAAATTGGAGGTTCATTCCAGTTCCCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_12380.p1 GENE.S_Transcript_12380~~S_Transcript_12380.p1 ORF type:complete len:1145 (+),score=227.15,Cellulose_synt|PF03552.10|0,zf-RING_4|PF14570.2|2.1e-15,Glyco_trans_2_3|PF13632.2|8.7e+02,Glyco_trans_2_3|PF13632.2|9.2e-07,Glyco_trans_2_3|PF13632.2|72,Glyco_tranf_2_3|PF13641.2|7.6,Glyco_tranf_2_3|PF13641.2|3.3e+03,Glyco_tranf_2_3|PF13641.2|0.0022 S_Transcript_12380:473-3907(+)
MASSRSFKHSRSALSSSSEASEMQQLRPPLPPTVTFARRTSSGRYVNYSRDDLDSELGSGEYANYTVQIPQTPDNQPMADPTVSQRVEEQYVSNSLFTGGFNSVTRAHLMDKVIESEASHPQMAGAKGSSCAIPGCDGNVMSDERGVDILPCECDFKICRDCYIDAVKSGESMCPGCKEPYKNTDLADTTGERPLPLPAPGGGMSKMERRLSLMKSTKSVLMRSQTGDFDHSRWLFETKGTYGYGNAIWPKEGGPASGNDNNGEVHEPQELMSKPWRPLTRKLKIPAAILSPYRLLIFVRMAVLGLFLAWRVKHKNEDAIWLWGMSVVCELWFAFSWLLDQLPKLCPVNRATDLNVLKEKFETPSPNNPTGKSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANVWVPFCRKHNIEPRNPESYFSLKKDPYKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYHAREEIKALKLQRQNPTDEPMDVIKIPKATWMADGTHWPGTWIHSSQEHSRGDHAGVIQVMLKPPSEDPLHGATDESRLIDLTDVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSQAMREGMCFMMDRGGDRICYVQFPQRFEGIDPSDRYANNNTVFFDVNMRALDGLQGPVYVGTGCLFRRMALYGFDPPRSKDRAPSFWDCCFPCRKKLAAAEENRALRMGDSDDEEMPFATFPKKFGNSRFLLDSIPVAEFQGRPLADHPAVKNGRPPGALTIDRELLDASTVAEAINVISCWYEDKTEWGERVGWIYGSVTEDVVTGYRMHNRGWRSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAFLASPKMKILQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITVTLCILAMLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDNDDEFADLYIVKWTSLMIPPILIMMVNLIAIAVGFSRTIYSTIPQWSKLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLLAITISLLWVAIKPPSNTDQIGGSFQFP*

Click here to download the sequence:
Link to NCBI Protein BLAST